Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ELOCP14-201ENST00000428070 331 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.5□□□□□ -2.01
XRCC1P18887 RPL22P17-201ENST00000438729 315 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AL512286.1-201ENST00000439244 400 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 ELOCP7-201ENST00000439968 331 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AL513328.1-201ENST00000446460 224 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.5□□□□□ -2.01
XRCC1P18887 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
XRCC1P18887 AC112204.1-201ENST00000502591 103 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.5□□□□□ -2.01
XRCC1P18887 MTND4LP18-201ENST00000526864 291 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.5□□□□□ -2.01
XRCC1P18887 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.5□□□□□ -2.01
XRCC1P18887 ZNF321P-202ENST00000550843 495 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AC090888.1-201ENST00000561335 1141 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AC234778.2-201ENST00000566241 354 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 MTATP6P24-201ENST00000576835 677 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AC090616.2-202ENST00000584248 222 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AC005498.1-201ENST00000592125 465 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AC008739.2-201ENST00000597006 317 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AC010620.2-201ENST00000600135 313 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.5□□□□□ -2.01
XRCC1P18887 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.5□□□□□ -2.01
XRCC1P18887 FRG1KP-201ENST00000623592 341 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AL136313.1-201ENST00000624804 202 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AC093591.3-201ENST00000634516 308 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.5□□□□□ -2.01
XRCC1P18887 ZNF271P-202ENST00000465539 1970 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
XRCC1P18887 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
XRCC1P18887 RNA5SP393-201ENST00000363423 117 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 SNORD115.1-201ENST00000391109 76 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.49□□□□□ -2.01
XRCC1P18887 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.49□□□□□ -2.01
XRCC1P18887 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.49□□□□□ -2.01
XRCC1P18887 SUMO1P4-201ENST00000429430 302 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 AL365184.2-201ENST00000431139 435 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 HMGB1P27-201ENST00000431429 603 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 SNRPEP9-201ENST00000436794 238 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 GDI2P2-201ENST00000445131 608 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.49□□□□□ -2.01
XRCC1P18887 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.49□□□□□ -2.01
XRCC1P18887 MRPS17P3-201ENST00000465453 385 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 RPL30P6-201ENST00000475925 342 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.49□□□□□ -2.01
XRCC1P18887 RPF2P2-201ENST00000504693 896 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.49□□□□□ -2.01
XRCC1P18887 SNORA31.3-201ENST00000516029 96 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 RNA5SP402-201ENST00000517148 110 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 CKS1BP7-201ENST00000522230 235 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 MTCO1P47-201ENST00000523889 1271 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.49□□□□□ -2.01
XRCC1P18887 MRPS36P5-201ENST00000551909 298 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.49□□□□□ -2.01
XRCC1P18887 RPS3AP4-201ENST00000555161 764 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.49□□□□□ -2.01
XRCC1P18887 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
XRCC1P18887 AC121334.2-201ENST00000605387 271 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 AC018638.7-201ENST00000605836 1114 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 AC107294.1-201ENST00000609524 467 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 AL161734.1-201ENST00000609720 557 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.49□□□□□ -2.01
XRCC1P18887 AC008498.1-201ENST00000613012 531 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.49□□□□□ -2.01
XRCC1P18887 uc_338.12-201ENST00000616344 181 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 U4.3-201ENST00000621047 82 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.49□□□□□ -2.01
XRCC1P18887 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.49□□□□□ -2.01
XRCC1P18887 IGHVIII-44-202ENST00000636235 289 ntBASIC2.49□□□□□ -2.01
XRCC1P18887 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
XRCC1P18887 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
XRCC1P18887 U8.8-201ENST00000365399 135 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 RNU1-138P-201ENST00000384093 164 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.48□□□□□ -2.01
XRCC1P18887 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.48□□□□□ -2.01
XRCC1P18887 BTF3L4P3-201ENST00000418879 476 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 AL358075.3-201ENST00000426289 226 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.48□□□□□ -2.01
XRCC1P18887 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.48□□□□□ -2.01
XRCC1P18887 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.48□□□□□ -2.01
XRCC1P18887 MTND5P25-201ENST00000430499 799 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 CR769767.1-201ENST00000436337 346 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 MTATP6P30-201ENST00000443540 664 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.48□□□□□ -2.01
XRCC1P18887 SNORD97-201ENST00000459187 142 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.48□□□□□ -2.01
XRCC1P18887 AP000852.1-201ENST00000472460 573 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 AC126182.1-201ENST00000478134 357 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.48□□□□□ -2.01
XRCC1P18887 RN7SKP24-201ENST00000515888 284 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 RN7SKP40-201ENST00000517211 242 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 AC022634.1-201ENST00000520765 532 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
XRCC1P18887 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
XRCC1P18887 AL359999.1-201ENST00000604513 294 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.48□□□□□ -2.01
XRCC1P18887 AL356266.1-201ENST00000623311 483 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 CTSLP2-204ENST00000629029 392 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 AC010149.2-201ENST00000637608 315 ntBASIC2.48□□□□□ -2.01
XRCC1P18887 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms