Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MIR601-201ENST00000385256 79 ntBASIC0.48□□□□□ -2.33
VCANP13611 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.48□□□□□ -2.33
VCANP13611 RNU1-98P-201ENST00000458992 160 ntBASIC0.48□□□□□ -2.33
VCANP13611 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
VCANP13611 RNU6-452P-201ENST00000384406 107 ntBASIC0.48□□□□□ -2.33
VCANP13611 AC092832.1-201ENST00000422934 400 ntBASIC0.48□□□□□ -2.33
VCANP13611 AL121578.1-201ENST00000428051 892 ntBASIC0.48□□□□□ -2.33
VCANP13611 RSL24D1P8-201ENST00000434442 492 ntBASIC0.48□□□□□ -2.33
VCANP13611 RPL30P5-201ENST00000494923 336 ntBASIC0.48□□□□□ -2.33
VCANP13611 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.48□□□□□ -2.33
VCANP13611 AC073055.1-201ENST00000456901 1621 ntBASIC0.48□□□□□ -2.33
VCANP13611 MIR146A-201ENST00000385201 99 ntBASIC0.48□□□□□ -2.33
VCANP13611 SNORA46.1-201ENST00000391069 153 ntBASIC0.48□□□□□ -2.33
VCANP13611 RPL23AP95-201ENST00000426806 265 ntBASIC0.48□□□□□ -2.33
VCANP13611 SDAD1P3-201ENST00000427380 333 ntBASIC0.48□□□□□ -2.33
VCANP13611 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.48□□□□□ -2.33
VCANP13611 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.48□□□□□ -2.33
VCANP13611 HMGB3P3-201ENST00000510526 400 ntBASIC0.48□□□□□ -2.33
VCANP13611 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.48□□□□□ -2.33
VCANP13611 AC083899.3-201ENST00000603413 594 ntBASIC0.48□□□□□ -2.33
VCANP13611 AC009090.3-201ENST00000616553 565 ntBASIC0.48□□□□□ -2.33
VCANP13611 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.47□□□□□ -2.33
VCANP13611 MIR101-1-201ENST00000362265 75 ntBASIC0.47□□□□□ -2.33
VCANP13611 RNU1-96P-201ENST00000364163 162 ntBASIC0.47□□□□□ -2.33
VCANP13611 RNU4-42P-201ENST00000364738 142 ntBASIC0.47□□□□□ -2.33
VCANP13611 RNU6-970P-201ENST00000516312 107 ntBASIC0.47□□□□□ -2.33
VCANP13611 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
VCANP13611 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
VCANP13611 SNORA79B-201ENST00000410557 148 ntBASIC0.47□□□□□ -2.33
VCANP13611 MRPL35P3-201ENST00000421557 364 ntBASIC0.47□□□□□ -2.33
VCANP13611 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
VCANP13611 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.47□□□□□ -2.33
VCANP13611 HSBP1P1-201ENST00000555205 166 ntBASIC0.47□□□□□ -2.33
VCANP13611 SNORD118-201ENST00000363593 134 ntBASIC0.46□□□□□ -2.34
VCANP13611 RNU1-101P-201ENST00000391171 127 ntBASIC0.46□□□□□ -2.34
VCANP13611 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.46□□□□□ -2.34
VCANP13611 HSPE1P1-201ENST00000421494 318 ntBASIC0.46□□□□□ -2.34
VCANP13611 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.46□□□□□ -2.34
VCANP13611 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.46□□□□□ -2.34
VCANP13611 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.46□□□□□ -2.34
VCANP13611 AC008749.1-201ENST00000597650 306 ntBASIC0.46□□□□□ -2.34
VCANP13611 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.46□□□□□ -2.34
VCANP13611 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
VCANP13611 SNORA16B-201ENST00000364674 135 ntBASIC0.46□□□□□ -2.34
VCANP13611 RNA5SP167-201ENST00000365461 116 ntBASIC0.46□□□□□ -2.34
VCANP13611 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.46□□□□□ -2.34
VCANP13611 AC105252.1-201ENST00000503089 286 ntBASIC0.46□□□□□ -2.34
VCANP13611 MTCO1P30-201ENST00000515244 580 ntBASIC0.46□□□□□ -2.34
VCANP13611 DUSP12P1-201ENST00000612874 516 ntBASIC0.46□□□□□ -2.34
VCANP13611 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.46□□□□□ -2.34
VCANP13611 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
VCANP13611 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.46□□□□□ -2.34
VCANP13611 RPL30P14-201ENST00000482744 348 ntBASIC0.46□□□□□ -2.34
VCANP13611 AL160236.1-201ENST00000556317 195 ntBASIC0.46□□□□□ -2.34
VCANP13611 RSL24D1P11-201ENST00000591045 491 ntBASIC0.46□□□□□ -2.34
VCANP13611 MIR515-2-201ENST00000384883 83 ntBASIC0.45□□□□□ -2.34
VCANP13611 MIR515-1-201ENST00000384884 83 ntBASIC0.45□□□□□ -2.34
VCANP13611 AC010099.3-201ENST00000423896 409 ntBASIC0.45□□□□□ -2.34
VCANP13611 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.45□□□□□ -2.34
VCANP13611 AC093027.1-201ENST00000546698 429 ntBASIC0.45□□□□□ -2.34
VCANP13611 AC245128.3-201ENST00000594721 748 ntBASIC0.45□□□□□ -2.34
VCANP13611 CLIC4P2-201ENST00000601934 717 ntBASIC0.45□□□□□ -2.34
VCANP13611 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.45□□□□□ -2.34
VCANP13611 AC068446.3-201ENST00000555285 382 ntBASIC0.45□□□□□ -2.34
VCANP13611 AL157700.1-201ENST00000561973 1432 ntBASIC0.45□□□□□ -2.34
VCANP13611 AL357075.2-201ENST00000614906 189 ntBASIC0.45□□□□□ -2.34
VCANP13611 AL136313.1-201ENST00000624804 202 ntBASIC0.45□□□□□ -2.34
VCANP13611 AL356473.1-201ENST00000406203 1408 ntBASIC0.45□□□□□ -2.34
VCANP13611 MIR32-201ENST00000384965 70 ntBASIC0.45□□□□□ -2.34
VCANP13611 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.45□□□□□ -2.34
VCANP13611 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
VCANP13611 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.45□□□□□ -2.34
VCANP13611 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.44□□□□□ -2.34
VCANP13611 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.44□□□□□ -2.34
VCANP13611 AL353689.1-201ENST00000438895 199 ntBASIC0.44□□□□□ -2.34
VCANP13611 AC005410.1-202ENST00000460347 485 ntBASIC0.44□□□□□ -2.34
VCANP13611 NDUFS5P6-201ENST00000529136 295 ntBASIC0.44□□□□□ -2.34
VCANP13611 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.44□□□□□ -2.34
VCANP13611 RNU4-57P-201ENST00000515980 135 ntBASIC0.44□□□□□ -2.34
VCANP13611 SSR1P1-201ENST00000407630 814 ntBASIC0.43□□□□□ -2.34
VCANP13611 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.43□□□□□ -2.34
VCANP13611 RABEPKP1-201ENST00000440529 1026 ntBASIC0.43□□□□□ -2.34
VCANP13611 RPL39P29-201ENST00000447779 157 ntBASIC0.43□□□□□ -2.34
VCANP13611 CBX3P3-201ENST00000508108 532 ntBASIC0.43□□□□□ -2.34
VCANP13611 RLIMP2-201ENST00000427891 1563 ntBASIC0.43□□□□□ -2.34
VCANP13611 RNA5SP205-201ENST00000364653 136 ntBASIC0.43□□□□□ -2.34
VCANP13611 FO393413.1-201ENST00000402892 195 ntBASIC0.43□□□□□ -2.34
VCANP13611 RNU6-733P-201ENST00000410759 104 ntBASIC0.43□□□□□ -2.34
VCANP13611 AC092447.6-201ENST00000414578 210 ntBASIC0.43□□□□□ -2.34
VCANP13611 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.43□□□□□ -2.34
VCANP13611 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.43□□□□□ -2.34
VCANP13611 AC008945.2-201ENST00000606056 604 ntBASIC0.43□□□□□ -2.34
VCANP13611 AC245884.12-201ENST00000615364 59 ntBASIC0.43□□□□□ -2.34
VCANP13611 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
VCANP13611 SNORA7.2-201ENST00000364446 145 ntBASIC0.43□□□□□ -2.34
VCANP13611 AC093716.1-201ENST00000435923 377 ntBASIC0.43□□□□□ -2.34
VCANP13611 RPL39P28-201ENST00000465655 155 ntBASIC0.43□□□□□ -2.34
VCANP13611 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.43□□□□□ -2.34
VCANP13611 OFD1P18Y-201ENST00000420889 959 ntBASIC0.42□□□□□ -2.34
VCANP13611 AC067940.1-201ENST00000458411 300 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms