Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 HSBP1P1-201ENST00000555205 166 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
COL6A3P12111 AC243829.3-201ENST00000622177 108 ntBASIC0.73□□□□□ -2.29
COL6A3P12111 SNORA63.3-201ENST00000362682 132 ntBASIC0.72□□□□□ -2.29
COL6A3P12111 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A3P12111 AC010285.1-201ENST00000470580 392 ntBASIC0.72□□□□□ -2.29
COL6A3P12111 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A3P12111 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A3P12111 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.72□□□□□ -2.29
COL6A3P12111 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.72□□□□□ -2.29
COL6A3P12111 AC007785.2-201ENST00000598627 1916 ntBASIC0.72□□□□□ -2.29
COL6A3P12111 AP000567.1-201ENST00000406413 156 ntBASIC0.72□□□□□ -2.29
COL6A3P12111 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.72□□□□□ -2.29
COL6A3P12111 PTP4A1P1-201ENST00000420539 515 ntBASIC0.72□□□□□ -2.29
COL6A3P12111 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
COL6A3P12111 AC098591.2-201ENST00000510152 315 ntBASIC0.72□□□□□ -2.29
COL6A3P12111 AL391516.1-201ENST00000554380 2449 ntBASIC0.72□□□□□ -2.29
COL6A3P12111 AL356473.1-201ENST00000406203 1408 ntBASIC0.72□□□□□ -2.29
COL6A3P12111 Y_RNA.568-201ENST00000384742 113 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 AL590556.1-201ENST00000423231 483 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 AC117503.1-201ENST00000472241 394 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 AC105252.1-201ENST00000503089 286 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 AC096745.1-201ENST00000509945 370 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 CYCSP26-201ENST00000534107 320 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.71□□□□□ -2.3
COL6A3P12111 SNORA46.1-201ENST00000391069 153 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 RPL31P52-201ENST00000407532 367 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.71□□□□□ -2.3
COL6A3P12111 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.71□□□□□ -2.3
COL6A3P12111 AC241520.1-201ENST00000422654 1099 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.71□□□□□ -2.3
COL6A3P12111 MTND4LP12-201ENST00000448237 295 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 AC135999.1-201ENST00000478962 479 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.71□□□□□ -2.3
COL6A3P12111 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.71□□□□□ -2.3
COL6A3P12111 MIR6718-201ENST00000616153 80 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 RNU6-923P-201ENST00000364753 107 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 RNY3P5-201ENST00000384127 102 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 U8.14-201ENST00000390843 143 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 FO393413.1-201ENST00000402892 195 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.71□□□□□ -2.3
COL6A3P12111 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.71□□□□□ -2.3
COL6A3P12111 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.71□□□□□ -2.3
COL6A3P12111 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.71□□□□□ -2.3
COL6A3P12111 RNU6-1334P-201ENST00000516032 105 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 CD24P2-201ENST00000565486 219 ntBASIC0.71□□□□□ -2.3
COL6A3P12111 CBX3P1-201ENST00000325243 554 ntBASIC0.7□□□□□ -2.3
COL6A3P12111 Y_RNA.493-201ENST00000384422 102 ntBASIC0.7□□□□□ -2.3
COL6A3P12111 AC106901.1-201ENST00000425086 698 ntBASIC0.7□□□□□ -2.3
COL6A3P12111 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.7□□□□□ -2.3
COL6A3P12111 RNU6-782P-201ENST00000516852 104 ntBASIC0.7□□□□□ -2.3
COL6A3P12111 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.7□□□□□ -2.3
COL6A3P12111 Y_RNA.428-201ENST00000384078 102 ntBASIC0.7□□□□□ -2.3
COL6A3P12111 AC098583.1-201ENST00000480875 255 ntBASIC0.7□□□□□ -2.3
COL6A3P12111 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.7□□□□□ -2.3
COL6A3P12111 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.7□□□□□ -2.3
COL6A3P12111 AC000123.2-201ENST00000623124 461 ntBASIC0.7□□□□□ -2.3
COL6A3P12111 MTCO1P23-201ENST00000415223 1526 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 Y_RNA.475-201ENST00000384345 101 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 RNU4-72P-201ENST00000410754 173 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 AC005741.1-201ENST00000511094 432 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 AP003355.1-201ENST00000518956 587 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 ELOCP5-201ENST00000604924 333 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 AC009090.3-201ENST00000616553 565 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 AC027335.2-201ENST00000624030 375 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
COL6A3P12111 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 RNA5SP105-201ENST00000391123 113 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 HMGB1P17-201ENST00000403495 628 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 AC092648.1-201ENST00000425870 423 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 RPS29P8-201ENST00000445109 171 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.69□□□□□ -2.3
COL6A3P12111 XIAPP1-201ENST00000603162 600 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.69□□□□□ -2.3
COL6A3P12111 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 PCNAP1-201ENST00000505363 709 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 SNORD116-26-201ENST00000516006 96 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 AL163153.1-201ENST00000554223 283 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 AP001486.3-201ENST00000615334 372 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 XKRY2-202ENST00000623874 1581 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 XKRY-202ENST00000624960 1581 ntBASIC0.69□□□□□ -2.3
COL6A3P12111 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0.68□□□□□ -2.3
COL6A3P12111 AC073614.1-201ENST00000438690 650 ntBASIC0.68□□□□□ -2.3
COL6A3P12111 AC118469.1-201ENST00000442943 488 ntBASIC0.68□□□□□ -2.3
COL6A3P12111 AC243772.1-201ENST00000451620 410 ntBASIC0.68□□□□□ -2.3
COL6A3P12111 RPS27P23-201ENST00000487608 251 ntBASIC0.68□□□□□ -2.3
COL6A3P12111 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.68□□□□□ -2.3
COL6A3P12111 RNU6-970P-201ENST00000516312 107 ntBASIC0.68□□□□□ -2.3
COL6A3P12111 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.68□□□□□ -2.3
COL6A3P12111 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
COL6A3P12111 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.68□□□□□ -2.3
COL6A3P12111 MIR4493-201ENST00000584016 73 ntBASIC0.68□□□□□ -2.3
COL6A3P12111 AL136520.1-201ENST00000600311 1322 ntBASIC0.68□□□□□ -2.3
COL6A3P12111 AC114546.3-201ENST00000623582 1734 ntBASIC0.68□□□□□ -2.3
COL6A3P12111 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
COL6A3P12111 AC011155.1-201ENST00000316512 456 ntBASIC0.68□□□□□ -2.3
COL6A3P12111 MTCO3P4-201ENST00000419236 787 ntBASIC0.68□□□□□ -2.3
COL6A3P12111 RPS26P56-201ENST00000444468 240 ntBASIC0.68□□□□□ -2.3
COL6A3P12111 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.68□□□□□ -2.3
COL6A3P12111 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms