Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 HMGB1P27-201ENST00000431429 603 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 AL591704.1-201ENST00000432574 275 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 RPL9P32-201ENST00000464118 620 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 AC099522.1-202ENST00000514718 367 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 SNORA31.20-201ENST00000517111 133 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 RNU6-323P-201ENST00000521915 107 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 FAM60BP-201ENST00000578364 658 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 FAM27D1-201ENST00000612308 341 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 MIR4272-201ENST00000635924 64 ntBASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.76□□□□□ -1.49
CSB-PGBD3P0DP91 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 MTND5P6-201ENST00000422338 1798 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 AC004925.1-201ENST00000624256 2706 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 RNU6-173P-201ENST00000364215 104 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 Y_RNA.314-201ENST00000365114 102 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 SNORA70.4-201ENST00000365509 134 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 Y_RNA.785-201ENST00000384290 109 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 RNU6-434P-201ENST00000384376 107 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 AL158071.1-201ENST00000430315 461 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 RNU7-167P-201ENST00000459160 62 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 AC040926.1-201ENST00000530195 238 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 MIR5188-201ENST00000583467 113 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 RAC1P9-201ENST00000604990 392 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 AC131238.1-201ENST00000617135 328 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 FTX_2.1-201ENST00000618816 94 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 MIR6075-201ENST00000620782 95 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 SDR42E1P4-201ENST00000620894 481 ntBASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CSB-PGBD3P0DP91 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 AL133243.3-201ENST00000617415 3004 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 HSPA8P4-201ENST00000511877 1920 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 OR51H2P-202ENST00000641424 3046 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 OR56A5-201ENST00000340110 738 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 Y_RNA.276-201ENST00000364732 109 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 U3.15-201ENST00000365398 212 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 RNU1-63P-201ENST00000383902 164 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 HSPE1P8-201ENST00000406997 288 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 MIR548I2-201ENST00000408348 149 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 RPL23AP69-201ENST00000431134 458 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 AC007389.2-201ENST00000434630 306 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 AC133473.1-201ENST00000455173 299 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 AC110792.1-201ENST00000491826 472 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 AC026801.1-201ENST00000497178 464 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 MLLT10P2-201ENST00000506434 249 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 RNU2-69P-201ENST00000516061 100 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 SUB1P3-201ENST00000564581 315 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 RPL7P50-201ENST00000600588 727 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 AC091903.1-201ENST00000624322 454 ntBASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CSB-PGBD3P0DP91 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 RNU6-335P-201ENST00000364563 113 ntBASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 Y_RNA.462-201ENST00000384268 102 ntBASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 RNU6ATAC-201ENST00000408749 126 ntBASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 RNA5SP44-201ENST00000410446 133 ntBASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 HSPE1P6-201ENST00000479457 291 ntBASIC5.73□□□□□ -1.49
CSB-PGBD3P0DP91 AL592156.1-201ENST00000508758 304 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms