Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ZNF876P-202ENST00000398732 1485 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 UBE2L2-201ENST00000254302 429 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 SNORA11.1-201ENST00000408133 129 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 RNU6-575P-201ENST00000411326 105 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 RN7SKP101-201ENST00000411376 320 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AC007098.1-201ENST00000420122 367 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AL451054.2-201ENST00000420896 202 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 BX510359.4-201ENST00000423750 193 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 MTCO3P46-201ENST00000425787 232 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 VN1R108P-201ENST00000431580 830 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.21□□□□□ -2.22
CXCL1P09341 RPL7P54-201ENST00000438336 674 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AL691517.1-201ENST00000440833 1235 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 HMGN2P10-201ENST00000448085 265 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AL096803.2-201ENST00000450032 677 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.21□□□□□ -2.22
CXCL1P09341 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
CXCL1P09341 AC023790.1-201ENST00000482174 347 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AC018437.1-201ENST00000492214 406 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 MTCYBP35-201ENST00000503630 1137 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.21□□□□□ -2.22
CXCL1P09341 AP000916.1-201ENST00000533869 835 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AC006199.1-201ENST00000548728 219 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AC021739.1-201ENST00000559631 174 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 BNIP3P25-201ENST00000596023 559 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.21□□□□□ -2.22
CXCL1P09341 AC104763.2-201ENST00000604179 382 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AC103810.8-201ENST00000607347 118 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.21□□□□□ -2.22
CXCL1P09341 VN1R9P-201ENST00000614184 867 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AC091953.2-201ENST00000623979 160 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 AL590396.4-201ENST00000636779 956 ntBASIC1.21□□□□□ -2.22
CXCL1P09341 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 RNU1-42P-201ENST00000364033 160 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 RNU6-549P-201ENST00000384433 107 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 CISD1P1-201ENST00000393907 327 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 OR9R1P-201ENST00000412200 877 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 AL445183.3-201ENST00000414168 502 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.2□□□□□ -2.22
CXCL1P09341 VN1R36P-201ENST00000414936 291 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.2□□□□□ -2.22
CXCL1P09341 AC246680.2-201ENST00000422106 389 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.2□□□□□ -2.22
CXCL1P09341 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.2□□□□□ -2.22
CXCL1P09341 FAM103A2P-201ENST00000444122 354 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.2□□□□□ -2.22
CXCL1P09341 MTCYBP11-201ENST00000447254 1109 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.2□□□□□ -2.22
CXCL1P09341 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.2□□□□□ -2.22
CXCL1P09341 RNU7-140P-201ENST00000459546 60 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 RPL22P13-201ENST00000493291 347 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
CXCL1P09341 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.2□□□□□ -2.22
CXCL1P09341 RNU6-551P-201ENST00000516661 103 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.2□□□□□ -2.22
CXCL1P09341 MTCYBP23-201ENST00000558717 1102 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 AC110588.1-201ENST00000559699 137 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.2□□□□□ -2.22
CXCL1P09341 MIR4672-201ENST00000583126 81 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.2□□□□□ -2.22
CXCL1P09341 AP003973.1-201ENST00000604639 691 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.2□□□□□ -2.22
CXCL1P09341 AC009974.1-201ENST00000608881 455 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.2□□□□□ -2.22
CXCL1P09341 AC022202.1-201ENST00000613515 211 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 MKKS-204ENST00000639674 192 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 AC104454.1-201ENST00000421341 1401 ntBASIC1.2□□□□□ -2.22
CXCL1P09341 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
CXCL1P09341 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
CXCL1P09341 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CXCL1P09341 RNU4-82P-201ENST00000362443 140 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 RNU6-1066P-201ENST00000363573 105 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
CXCL1P09341 MCTS2P-201ENST00000394552 546 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 RNU6-955P-201ENST00000410497 104 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 RNU6-1140P-201ENST00000410517 106 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 BTF3P8-201ENST00000414577 526 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 MTCYBP38-201ENST00000417160 1123 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 RSU1P2-202ENST00000437884 485 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.19□□□□□ -2.22
CXCL1P09341 AL161651.1-201ENST00000440882 223 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 AC114878.1-201ENST00000441166 358 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 RPL30P9-201ENST00000465586 330 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 AC093752.1-206ENST00000511823 336 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 RNU6-840P-201ENST00000517275 65 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.19□□□□□ -2.22
CXCL1P09341 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.19□□□□□ -2.22
CXCL1P09341 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.19□□□□□ -2.22
CXCL1P09341 AC125611.1-201ENST00000549563 229 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 MIR3198-2-201ENST00000577868 80 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
CXCL1P09341 AC002545.1-201ENST00000592511 181 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.19□□□□□ -2.22
CXCL1P09341 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.19□□□□□ -2.22
CXCL1P09341 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.19□□□□□ -2.22
CXCL1P09341 AC087241.4-201ENST00000612441 480 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 AC011939.3-201ENST00000613686 466 ntBASIC1.19□□□□□ -2.22
CXCL1P09341 AC064859.1-201ENST00000624741 174 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms