Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.45□□□□□ -1.86
MMP3P08254 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MMP3P08254 AC109635.4-202ENST00000531666 412 ntBASIC3.45□□□□□ -1.86
MMP3P08254 SNRPGP16-201ENST00000533275 226 ntBASIC3.45□□□□□ -1.86
MMP3P08254 AL359212.1-201ENST00000556608 614 ntBASIC3.45□□□□□ -1.86
MMP3P08254 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.45□□□□□ -1.86
MMP3P08254 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.45□□□□□ -1.86
MMP3P08254 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.45□□□□□ -1.86
MMP3P08254 SNHG22-203ENST00000617833 660 ntBASIC3.45□□□□□ -1.86
MMP3P08254 XIST_intron.1-201ENST00000619444 68 ntBASIC3.45□□□□□ -1.86
MMP3P08254 AC093648.1-201ENST00000623546 606 ntBASIC3.45□□□□□ -1.86
MMP3P08254 AC091903.1-201ENST00000624322 454 ntBASIC3.45□□□□□ -1.86
MMP3P08254 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
MMP3P08254 AL157700.1-201ENST00000561973 1432 ntBASIC3.44□□□□□ -1.86
MMP3P08254 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MMP3P08254 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
MMP3P08254 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
MMP3P08254 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.44□□□□□ -1.86
MMP3P08254 AC091152.2-201ENST00000591628 2569 ntBASIC3.44□□□□□ -1.86
MMP3P08254 MIR22-201ENST00000362190 85 ntBASIC3.44□□□□□ -1.86
MMP3P08254 RNU6-600P-201ENST00000362524 99 ntBASIC3.44□□□□□ -1.86
MMP3P08254 Y_RNA.89-201ENST00000363031 102 ntBASIC3.44□□□□□ -1.86
MMP3P08254 SNORA62.1-201ENST00000364287 154 ntBASIC3.44□□□□□ -1.86
MMP3P08254 RNU6-534P-201ENST00000364877 106 ntBASIC3.44□□□□□ -1.86
MMP3P08254 Y_RNA.295-201ENST00000364918 102 ntBASIC3.44□□□□□ -1.86
MMP3P08254 RNU6-701P-201ENST00000384059 107 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AL031121.1-201ENST00000406553 254 ntBASIC3.44□□□□□ -1.86
MMP3P08254 USP9YP6-201ENST00000413550 854 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AC114491.1-201ENST00000416095 246 ntBASIC3.44□□□□□ -1.86
MMP3P08254 MRPL50P2-201ENST00000416821 482 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AL139132.1-201ENST00000431587 344 ntBASIC3.44□□□□□ -1.86
MMP3P08254 GTF2IP20-201ENST00000431663 360 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AC000111.3-201ENST00000433478 193 ntBASIC3.44□□□□□ -1.86
MMP3P08254 HMGB3P12-201ENST00000438745 556 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.44□□□□□ -1.86
MMP3P08254 RPS29P26-201ENST00000477483 171 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AC108860.1-201ENST00000484521 383 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AL049874.1-201ENST00000489560 388 ntBASIC3.44□□□□□ -1.86
MMP3P08254 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.44□□□□□ -1.86
MMP3P08254 RN7SKP272-201ENST00000516988 232 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.44□□□□□ -1.86
MMP3P08254 NDUFB9P3-201ENST00000521269 501 ntBASIC3.44□□□□□ -1.86
MMP3P08254 ERHP1-201ENST00000523006 310 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AP003072.2-201ENST00000527756 676 ntBASIC3.44□□□□□ -1.86
MMP3P08254 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
MMP3P08254 AP003034.1-201ENST00000534621 422 ntBASIC3.44□□□□□ -1.86
MMP3P08254 OR4H12P-201ENST00000556269 907 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.44□□□□□ -1.86
MMP3P08254 MIR3186-201ENST00000577404 85 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.44□□□□□ -1.86
MMP3P08254 AP001029.3-201ENST00000588063 596 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AC008752.3-201ENST00000588113 712 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.44□□□□□ -1.86
MMP3P08254 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.44□□□□□ -1.86
MMP3P08254 AC012443.1-201ENST00000605605 231 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AC104458.1-201ENST00000608243 463 ntBASIC3.44□□□□□ -1.86
MMP3P08254 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.44□□□□□ -1.86
MMP3P08254 U7.8-201ENST00000619968 63 ntBASIC3.44□□□□□ -1.86
MMP3P08254 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.44□□□□□ -1.86
MMP3P08254 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MMP3P08254 AC116096.1-201ENST00000566804 2314 ntBASIC3.44□□□□□ -1.86
MMP3P08254 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
MMP3P08254 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MMP3P08254 AC004520.1-201ENST00000608362 1413 ntBASIC3.44□□□□□ -1.86
MMP3P08254 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.43□□□□□ -1.86
MMP3P08254 RNU6-223P-201ENST00000362830 107 ntBASIC3.43□□□□□ -1.86
MMP3P08254 RNA5SP189-201ENST00000364920 115 ntBASIC3.43□□□□□ -1.86
MMP3P08254 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MMP3P08254 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MMP3P08254 TXNP7-201ENST00000406296 293 ntBASIC3.43□□□□□ -1.86
MMP3P08254 RNU2-39P-201ENST00000410604 198 ntBASIC3.43□□□□□ -1.86
MMP3P08254 EEF1A1P41-201ENST00000414667 207 ntBASIC3.43□□□□□ -1.86
MMP3P08254 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.43□□□□□ -1.86
MMP3P08254 EI24P1-201ENST00000416584 867 ntBASIC3.43□□□□□ -1.86
MMP3P08254 MED13P1-201ENST00000428342 171 ntBASIC3.43□□□□□ -1.86
MMP3P08254 HMGB1P31-201ENST00000437242 427 ntBASIC3.43□□□□□ -1.86
MMP3P08254 SETP5-201ENST00000437270 562 ntBASIC3.43□□□□□ -1.86
MMP3P08254 MTATP6P23-201ENST00000440153 476 ntBASIC3.43□□□□□ -1.86
MMP3P08254 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.43□□□□□ -1.86
MMP3P08254 DPPA3P1-201ENST00000448050 469 ntBASIC3.43□□□□□ -1.86
MMP3P08254 CACYBPP2-201ENST00000453625 678 ntBASIC3.43□□□□□ -1.86
MMP3P08254 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.43□□□□□ -1.86
MMP3P08254 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.43□□□□□ -1.86
MMP3P08254 RNU7-63P-201ENST00000459054 62 ntBASIC3.43□□□□□ -1.86
MMP3P08254 RPS4XP22-201ENST00000480755 780 ntBASIC3.43□□□□□ -1.86
MMP3P08254 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.43□□□□□ -1.86
MMP3P08254 AL157687.1-201ENST00000554853 619 ntBASIC3.43□□□□□ -1.86
MMP3P08254 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.43□□□□□ -1.86
MMP3P08254 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.43□□□□□ -1.86
MMP3P08254 MIR4672-201ENST00000583126 81 ntBASIC3.43□□□□□ -1.86
MMP3P08254 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.43□□□□□ -1.86
MMP3P08254 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.43□□□□□ -1.86
MMP3P08254 RPL12P50-201ENST00000603116 116 ntBASIC3.43□□□□□ -1.86
MMP3P08254 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.43□□□□□ -1.86
MMP3P08254 AL360181.4-201ENST00000621752 134 ntBASIC3.43□□□□□ -1.86
MMP3P08254 AC092628.2-201ENST00000622492 339 ntBASIC3.43□□□□□ -1.86
MMP3P08254 MIR1321-201ENST00000637766 79 ntBASIC3.43□□□□□ -1.86
MMP3P08254 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.43□□□□□ -1.86
MMP3P08254 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MMP3P08254 AP001350.1-201ENST00000601906 1524 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms