Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC004805.2-201ENST00000605382 482 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC068787.1-201ENST00000623908 691 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC007490.1-201ENST00000624321 703 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 MIR1291-201ENST00000627649 87 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC243829.7-201ENST00000633081 225 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC092192.1-201ENST00000633154 1018 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 AC016717.2-201ENST00000609089 5141 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 CR848007.1-201ENST00000442354 1699 ntBASIC2.06□□□□□ -2.08
HLA-DPB1P04440 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.06□□□□□ -2.08
HLA-DPB1P04440 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC026241.1-201ENST00000517873 2142 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 Y_RNA.18-201ENST00000362461 102 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 RNU6-1180P-201ENST00000364935 107 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 SET-203ENST00000372688 801 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 RNU6-253P-201ENST00000384730 105 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 U8.14-201ENST00000390843 143 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 UBE2V1P2-201ENST00000397758 440 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AL591416.1-201ENST00000404015 867 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 BX682237.1-201ENST00000415016 335 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 MTND2P9-201ENST00000422293 931 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 SNRPEP9-201ENST00000436794 238 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 RPL26P9-201ENST00000457466 433 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC107626.1-201ENST00000471084 183 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 RPS27AP10-201ENST00000496103 208 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 RPL37P25-201ENST00000507308 276 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC026436.1-201ENST00000510537 270 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 RN7SKP265-201ENST00000516448 223 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 RN7SKP258-201ENST00000517151 304 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC022634.1-201ENST00000520765 532 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC021269.2-201ENST00000532318 330 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 MYL12BP1-201ENST00000569826 507 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 MIR4672-201ENST00000583126 81 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AP000811.1-201ENST00000603803 651 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AL161798.1-201ENST00000604630 131 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC245517.5-201ENST00000611529 162 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC008498.1-201ENST00000613012 531 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 AC007671.2-201ENST00000637344 619 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DPB1P04440 ZNF519P1-201ENST00000449011 1626 ntBASIC2.05□□□□□ -2.08
HLA-DPB1P04440 RNU6-1167P-201ENST00000363227 94 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 Y_RNA.111-201ENST00000363248 100 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 MIR888-201ENST00000401186 77 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 RPS20P2-201ENST00000402520 389 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC098592.1-201ENST00000419352 333 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 ELOCP14-201ENST00000428070 331 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 TIMM9P1-201ENST00000436122 256 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 RPS15AP5-201ENST00000436276 388 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 ELOCP7-201ENST00000439968 331 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 RPS15AP27-201ENST00000449183 343 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC013267.1-201ENST00000458227 267 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC004263.1-201ENST00000479327 332 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 GZMAP1-201ENST00000503054 631 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AP001646.1-201ENST00000527936 915 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC123904.2-201ENST00000548059 300 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AL356432.3-201ENST00000568952 465 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC234772.3-201ENST00000602277 528 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AL355877.2-201ENST00000603670 358 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC098826.3-201ENST00000603823 466 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC239868.4-201ENST00000608318 671 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 OR10AB1P-201ENST00000609613 938 ntBASIC2.04□□□□□ -2.08
HLA-DPB1P04440 AC046143.2-201ENST00000609789 160 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms