Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MT-ND4P03905 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.93□□□□□ -2.1
MT-ND4P03905 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.93□□□□□ -2.1
MT-ND4P03905 AC135628.1-201ENST00000568867 534 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 MIR5007-201ENST00000583098 95 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.93□□□□□ -2.1
MT-ND4P03905 BNIP3P22-201ENST00000593399 556 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 RPP40P2-201ENST00000603596 712 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AC006023.1-201ENST00000603944 259 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 RNU6-88P-201ENST00000606801 100 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AC009974.1-201ENST00000608881 455 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AC004908.2-201ENST00000609090 574 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.93□□□□□ -2.1
MT-ND4P03905 U2.21-201ENST00000637295 81 ntBASIC1.93□□□□□ -2.1
MT-ND4P03905 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
MT-ND4P03905 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MT-ND4P03905 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MT-ND4P03905 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MT-ND4P03905 Y_RNA.245-201ENST00000364493 95 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 SNORA16B-201ENST00000364674 135 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 RNU6-220P-201ENST00000390919 107 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 RNU6-750P-201ENST00000390946 107 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 HMGB1P11-201ENST00000413899 637 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.92□□□□□ -2.1
MT-ND4P03905 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.92□□□□□ -2.1
MT-ND4P03905 AC004854.1-201ENST00000440356 349 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 AC005094.1-201ENST00000440420 368 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.92□□□□□ -2.1
MT-ND4P03905 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.92□□□□□ -2.1
MT-ND4P03905 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.92□□□□□ -2.1
MT-ND4P03905 RN7SL636P-201ENST00000497504 294 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 SCARNA11.3-201ENST00000517276 130 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.92□□□□□ -2.1
MT-ND4P03905 AC093012.1-202ENST00000549403 582 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.92□□□□□ -2.1
MT-ND4P03905 AC027176.1-201ENST00000560204 514 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.92□□□□□ -2.1
MT-ND4P03905 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.92□□□□□ -2.1
MT-ND4P03905 AC136618.2-201ENST00000575091 400 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 MIR544B-201ENST00000582372 78 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.92□□□□□ -2.1
MT-ND4P03905 VN1R82P-201ENST00000601481 356 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 AP000403.1-201ENST00000603349 851 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 BCRP9-201ENST00000605312 388 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 AL449363.1-201ENST00000617815 186 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
MT-ND4P03905 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
MT-ND4P03905 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.92□□□□□ -2.1
MT-ND4P03905 AC092125.1-201ENST00000562568 1995 ntBASIC1.92□□□□□ -2.1
MT-ND4P03905 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
MT-ND4P03905 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
MT-ND4P03905 AC080128.1-201ENST00000474389 1917 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC004944.1-201ENST00000517807 3059 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
MT-ND4P03905 MTND4P27-201ENST00000450813 1354 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 RNU6-1167P-201ENST00000363227 94 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 RNU6-778P-201ENST00000363269 103 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 RPS4XP8-201ENST00000402039 771 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AL359634.1-202ENST00000404721 284 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AL356379.1-201ENST00000414105 126 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC009963.1-201ENST00000417265 157 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 HMGB1P49-201ENST00000418882 569 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 MED14P1-201ENST00000430517 648 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC084290.1-201ENST00000434995 374 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND4P03905 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND4P03905 OSTCP8-201ENST00000445117 448 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND4P03905 AL021397.1-201ENST00000451806 248 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 RNU7-59P-201ENST00000459101 61 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
MT-ND4P03905 AC109486.1-201ENST00000486833 374 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC055855.1-201ENST00000489563 579 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC106872.3-201ENST00000495104 446 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
MT-ND4P03905 AC091951.3-201ENST00000504093 246 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC119751.4-201ENST00000507498 357 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND4P03905 RNU5F-8P-201ENST00000515941 111 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND4P03905 AP005902.1-201ENST00000521358 186 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.91□□□□□ -2.1
MT-ND4P03905 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
MT-ND4P03905 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND4P03905 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND4P03905 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.91□□□□□ -2.1
MT-ND4P03905 AC234778.2-201ENST00000566241 354 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 MTCO2P2-201ENST00000591258 225 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AL391001.1-201ENST00000602747 715 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AL139022.2-201ENST00000606934 443 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC072039.2-201ENST00000608883 439 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND4P03905 AC009159.1-201ENST00000618386 642 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AC013470.4-201ENST00000619978 986 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AL136313.1-201ENST00000624804 202 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 CTSLP2-204ENST00000629029 392 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.91□□□□□ -2.1
MT-ND4P03905 ELF2P3-201ENST00000445099 1506 ntBASIC1.91□□□□□ -2.1
MT-ND4P03905 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms