Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
HLA-DQB1P01920 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 GNG5P1-201ENST00000255500 204 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC062016.1-201ENST00000355719 319 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 MIR208A-201ENST00000362287 71 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 RNU1-105P-201ENST00000363470 161 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 MIR196B-201ENST00000384852 84 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 RNU2-40P-201ENST00000410833 196 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 VPS26BP1-201ENST00000417155 755 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 USP9YP13-201ENST00000417797 480 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 SKA2P1-201ENST00000425592 390 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 ELOCP14-201ENST00000428070 331 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 MYL8P-204ENST00000431574 518 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 MTND1P28-201ENST00000435623 950 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 ELOCP7-201ENST00000439968 331 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 RPS3AP12-201ENST00000443616 753 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 MTND4LP3-201ENST00000468320 276 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 MTND2P14-201ENST00000482139 351 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 RPS15AP34-201ENST00000487776 387 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC114786.4-201ENST00000508771 728 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 MTND5P13-201ENST00000513046 1079 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC114797.1-201ENST00000514003 728 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC093012.1-202ENST00000549403 582 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC090888.2-201ENST00000559765 1144 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC009097.3-201ENST00000563557 1018 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC008751.2-201ENST00000597885 980 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AP000403.1-201ENST00000603349 851 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AL391813.2-201ENST00000609113 322 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AC046143.2-201ENST00000609789 160 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 TUSC7.1-201ENST00000610969 165 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 UCA1.1-201ENST00000620952 75 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 DUXAP9-208ENST00000622815 614 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 AL136313.1-201ENST00000624804 202 ntBASIC1.91□□□□□ -2.1
HLA-DQB1P01920 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DQB1P01920 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HLA-DQB1P01920 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RNU6-1214P-201ENST00000363650 109 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RNU6-884P-201ENST00000363889 107 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RNU6-461P-201ENST00000364195 107 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 SNORA68.1-201ENST00000364537 132 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RNU6-7-201ENST00000364784 107 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 SNORA72.3-201ENST00000365074 132 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RNU6-8-201ENST00000365467 107 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RNU6-14P-201ENST00000384630 106 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 SNORA48.3-201ENST00000391081 134 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RNA5SP354-201ENST00000391247 136 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RNA5SP184-201ENST00000411071 108 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AC007064.1-201ENST00000412238 351 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AC098614.2-201ENST00000426040 255 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DQB1P01920 Z80107.1-201ENST00000436830 412 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DQB1P01920 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AC090515.1-201ENST00000465295 476 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RBM43P1-201ENST00000476891 1081 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AC109486.1-201ENST00000486833 374 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RPF2P2-201ENST00000504693 896 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RNA5SP24-201ENST00000516478 95 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RNA5SP471-201ENST00000516971 106 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 RNU6-1003P-201ENST00000517099 105 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AC022634.1-201ENST00000520765 532 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AC021269.2-201ENST00000532318 330 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DQB1P01920 MIR4319-201ENST00000577285 85 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 AC011471.1-201ENST00000585766 187 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 NRBF2P5-201ENST00000603087 788 ntBASIC1.9□□□□□ -2.11
HLA-DQB1P01920 DPPA3P3-201ENST00000603842 430 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms