Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.01□□□□□ -2.25
ABCA1O95477 DUXAP1-201ENST00000556632 463 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
ABCA1O95477 MIR4287-201ENST00000579398 78 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.01□□□□□ -2.25
ABCA1O95477 AC106052.1-201ENST00000608029 497 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 AL162373.1-201ENST00000620433 407 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
ABCA1O95477 AP000560.1-201ENST00000624150 1937 ntBASIC1.01□□□□□ -2.25
ABCA1O95477 MIR373-201ENST00000362273 69 ntBASIC1□□□□□ -2.25
ABCA1O95477 SNORA18.2-201ENST00000383865 132 ntBASIC1□□□□□ -2.25
ABCA1O95477 RPL7P27-201ENST00000403775 720 ntBASIC1□□□□□ -2.25
ABCA1O95477 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1□□□□□ -2.25
ABCA1O95477 RPL31P63-201ENST00000422565 375 ntBASIC1□□□□□ -2.25
ABCA1O95477 AL512661.1-201ENST00000434586 1253 ntBASIC1□□□□□ -2.25
ABCA1O95477 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1□□□□□ -2.25
ABCA1O95477 Z82190.1-201ENST00000454534 490 ntBASIC1□□□□□ -2.25
ABCA1O95477 MTND4LP3-201ENST00000468320 276 ntBASIC1□□□□□ -2.25
ABCA1O95477 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1□□□□□ -2.25
ABCA1O95477 RPS27P21-201ENST00000486977 252 ntBASIC1□□□□□ -2.25
ABCA1O95477 COL6A4P2-205ENST00000509855 506 ntBASIC1□□□□□ -2.25
ABCA1O95477 AC083923.1-201ENST00000523708 376 ntBASIC1□□□□□ -2.25
ABCA1O95477 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
ABCA1O95477 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1□□□□□ -2.25
ABCA1O95477 AC010186.2-204ENST00000537668 439 ntBASIC1□□□□□ -2.25
ABCA1O95477 NTS-203ENST00000551529 801 ntTSL 3 BASIC1□□□□□ -2.25
ABCA1O95477 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1□□□□□ -2.25
ABCA1O95477 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1□□□□□ -2.25
ABCA1O95477 MIR3198-2-201ENST00000577868 80 ntBASIC1□□□□□ -2.25
ABCA1O95477 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1□□□□□ -2.25
ABCA1O95477 AC016542.1-201ENST00000608259 493 ntBASIC1□□□□□ -2.25
ABCA1O95477 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1□□□□□ -2.25
ABCA1O95477 AL590396.2-201ENST00000636511 1041 ntBASIC1□□□□□ -2.25
ABCA1O95477 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1□□□□□ -2.25
ABCA1O95477 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1□□□□□ -2.25
ABCA1O95477 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1□□□□□ -2.25
ABCA1O95477 RNU1-133P-201ENST00000364867 167 ntBASIC1□□□□□ -2.25
ABCA1O95477 MIR7-1-201ENST00000384871 110 ntBASIC1□□□□□ -2.25
ABCA1O95477 RNU6-272P-201ENST00000411028 104 ntBASIC1□□□□□ -2.25
ABCA1O95477 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1□□□□□ -2.25
ABCA1O95477 AC055731.1-201ENST00000474387 401 ntBASIC1□□□□□ -2.25
ABCA1O95477 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1□□□□□ -2.25
ABCA1O95477 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1□□□□□ -2.25
ABCA1O95477 AC087854.1-201ENST00000519706 414 ntBASIC1□□□□□ -2.25
ABCA1O95477 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1□□□□□ -2.25
ABCA1O95477 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1□□□□□ -2.25
ABCA1O95477 FAM60BP-201ENST00000578364 658 ntBASIC1□□□□□ -2.25
ABCA1O95477 AC020658.4-201ENST00000613987 684 ntBASIC1□□□□□ -2.25
ABCA1O95477 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1□□□□□ -2.25
ABCA1O95477 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1□□□□□ -2.25
ABCA1O95477 AC092608.3-201ENST00000625017 386 ntBASIC1□□□□□ -2.25
ABCA1O95477 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1□□□□□ -2.25
ABCA1O95477 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
ABCA1O95477 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
ABCA1O95477 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 SRIP3-201ENST00000413200 219 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 AL121601.2-201ENST00000438019 707 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA1O95477 MTND1P33-201ENST00000446251 917 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 TRGVB-201ENST00000453257 471 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 RPS29P23-201ENST00000458635 123 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 MTCYBP35-201ENST00000503630 1137 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA1O95477 SNORA31.18-201ENST00000517043 134 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA1O95477 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA1O95477 AL133241.1-201ENST00000556832 487 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 HSPE1P3-201ENST00000559254 309 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA1O95477 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 AC008749.1-201ENST00000597650 306 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA1O95477 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.99□□□□□ -2.25
ABCA1O95477 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.99□□□□□ -2.25
ABCA1O95477 LINC02211-204ENST00000642024 1070 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
ABCA1O95477 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.99□□□□□ -2.25
ABCA1O95477 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.99□□□□□ -2.25
ABCA1O95477 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.99□□□□□ -2.25
ABCA1O95477 RNU6-921P-201ENST00000384361 107 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 AC016769.3-201ENST00000396562 315 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 RNU2-43P-201ENST00000410306 190 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 SNORD56-201ENST00000413522 71 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 AL445305.1-201ENST00000432577 575 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.99□□□□□ -2.25
ABCA1O95477 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.99□□□□□ -2.25
ABCA1O95477 THAP5P1-201ENST00000439089 262 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 MTCYBP3-201ENST00000445588 1137 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
ABCA1O95477 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.99□□□□□ -2.25
ABCA1O95477 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA1O95477 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA1O95477 RNU6-113P-201ENST00000516653 101 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.99□□□□□ -2.25
ABCA1O95477 MTCYBP27-201ENST00000555160 670 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 AC007151.1-201ENST00000572774 483 ntBASIC0.99□□□□□ -2.25
ABCA1O95477 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.99□□□□□ -2.25
ABCA1O95477 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
ABCA1O95477 U3.20-201ENST00000390909 217 ntBASIC0.98□□□□□ -2.25
ABCA1O95477 RNA5SP465-201ENST00000391195 109 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms