Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RNU6-18P-201ENST00000384527 107 ntBASIC1.08□□□□□ -2.24
LTN1O94822 MIR320B1-201ENST00000390209 79 ntBASIC1.08□□□□□ -2.24
LTN1O94822 SFR1P1-201ENST00000403720 688 ntBASIC1.08□□□□□ -2.24
LTN1O94822 UBE2FP1-201ENST00000416536 447 ntBASIC1.08□□□□□ -2.24
LTN1O94822 AC006548.1-201ENST00000427470 102 ntBASIC1.08□□□□□ -2.24
LTN1O94822 AC016691.1-201ENST00000441321 413 ntBASIC1.08□□□□□ -2.24
LTN1O94822 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.08□□□□□ -2.24
LTN1O94822 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.08□□□□□ -2.24
LTN1O94822 RPS20P20-201ENST00000460498 340 ntBASIC1.08□□□□□ -2.24
LTN1O94822 LARP7P4-201ENST00000481075 878 ntBASIC1.08□□□□□ -2.24
LTN1O94822 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
LTN1O94822 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.08□□□□□ -2.24
LTN1O94822 AC084033.1-201ENST00000550830 633 ntBASIC1.08□□□□□ -2.24
LTN1O94822 AL592148.2-201ENST00000612210 372 ntBASIC1.08□□□□□ -2.24
LTN1O94822 CR381572.1-201ENST00000625098 102 ntBASIC1.08□□□□□ -2.24
LTN1O94822 LINC02211-204ENST00000642024 1070 ntBASIC1.08□□□□□ -2.24
LTN1O94822 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.08□□□□□ -2.24
LTN1O94822 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.08□□□□□ -2.24
LTN1O94822 TPT1P8-201ENST00000510120 555 ntBASIC1.08□□□□□ -2.24
LTN1O94822 AC107954.1-201ENST00000565906 727 ntBASIC1.08□□□□□ -2.24
LTN1O94822 AC092474.3-201ENST00000603022 568 ntBASIC1.08□□□□□ -2.24
LTN1O94822 AL009028.1-201ENST00000604895 802 ntBASIC1.08□□□□□ -2.24
LTN1O94822 RN7SKP158-201ENST00000410453 326 ntBASIC1.07□□□□□ -2.24
LTN1O94822 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.07□□□□□ -2.24
LTN1O94822 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.07□□□□□ -2.24
LTN1O94822 AL022238.1-201ENST00000442557 355 ntBASIC1.07□□□□□ -2.24
LTN1O94822 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.07□□□□□ -2.24
LTN1O94822 AL353718.1-201ENST00000451028 517 ntBASIC1.07□□□□□ -2.24
LTN1O94822 snoU109.1-201ENST00000459339 135 ntBASIC1.07□□□□□ -2.24
LTN1O94822 MTND2P26-201ENST00000528255 1029 ntBASIC1.07□□□□□ -2.24
LTN1O94822 AC025423.2-201ENST00000537570 439 ntBASIC1.07□□□□□ -2.24
LTN1O94822 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.07□□□□□ -2.24
LTN1O94822 AC087465.1-201ENST00000560574 245 ntBASIC1.07□□□□□ -2.24
LTN1O94822 VN1R81P-201ENST00000602085 372 ntBASIC1.07□□□□□ -2.24
LTN1O94822 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.07□□□□□ -2.24
LTN1O94822 HAUS6P2-201ENST00000433254 2404 ntBASIC1.07□□□□□ -2.24
LTN1O94822 RNU1-72P-201ENST00000362976 153 ntBASIC1.06□□□□□ -2.24
LTN1O94822 RNA5SP391-201ENST00000363456 119 ntBASIC1.06□□□□□ -2.24
LTN1O94822 UBE2V1P9-201ENST00000414760 368 ntBASIC1.06□□□□□ -2.24
LTN1O94822 AC244636.1-201ENST00000421152 228 ntBASIC1.06□□□□□ -2.24
LTN1O94822 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LTN1O94822 Z80107.1-201ENST00000436830 412 ntBASIC1.06□□□□□ -2.24
LTN1O94822 AC005908.1-201ENST00000468701 347 ntBASIC1.06□□□□□ -2.24
LTN1O94822 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.06□□□□□ -2.24
LTN1O94822 Y_RNA.68-201ENST00000362881 102 ntBASIC1.06□□□□□ -2.24
LTN1O94822 RNU6-492P-201ENST00000363035 104 ntBASIC1.06□□□□□ -2.24
LTN1O94822 SNORD26-201ENST00000384147 75 ntBASIC1.06□□□□□ -2.24
LTN1O94822 U3.20-201ENST00000390909 217 ntBASIC1.06□□□□□ -2.24
LTN1O94822 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.06□□□□□ -2.24
LTN1O94822 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.06□□□□□ -2.24
LTN1O94822 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.06□□□□□ -2.24
LTN1O94822 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.06□□□□□ -2.24
LTN1O94822 CBX3P6-201ENST00000430257 527 ntBASIC1.06□□□□□ -2.24
LTN1O94822 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.06□□□□□ -2.24
LTN1O94822 AC112518.2-201ENST00000508565 425 ntBASIC1.06□□□□□ -2.24
LTN1O94822 AC104806.1-201ENST00000508720 308 ntBASIC1.06□□□□□ -2.24
LTN1O94822 AC008834.1-201ENST00000511612 175 ntBASIC1.06□□□□□ -2.24
LTN1O94822 AC093752.1-206ENST00000511823 336 ntBASIC1.06□□□□□ -2.24
LTN1O94822 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.06□□□□□ -2.24
LTN1O94822 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.06□□□□□ -2.24
LTN1O94822 AC103810.8-201ENST00000607347 118 ntBASIC1.06□□□□□ -2.24
LTN1O94822 MIR924-201ENST00000638017 53 ntBASIC1.06□□□□□ -2.24
LTN1O94822 Y_RNA.258-201ENST00000364613 105 ntBASIC1.05□□□□□ -2.24
LTN1O94822 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
LTN1O94822 RPS3AP24-201ENST00000407896 734 ntBASIC1.05□□□□□ -2.24
LTN1O94822 AC244453.4-201ENST00000419150 388 ntBASIC1.05□□□□□ -2.24
LTN1O94822 AC246680.2-201ENST00000422106 389 ntBASIC1.05□□□□□ -2.24
LTN1O94822 AC244035.1-201ENST00000430042 390 ntBASIC1.05□□□□□ -2.24
LTN1O94822 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.05□□□□□ -2.24
LTN1O94822 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.05□□□□□ -2.24
LTN1O94822 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.05□□□□□ -2.24
LTN1O94822 MIR3198-2-201ENST00000577868 80 ntBASIC1.05□□□□□ -2.24
LTN1O94822 AC005498.1-201ENST00000592125 465 ntBASIC1.05□□□□□ -2.24
LTN1O94822 AC090970.3-201ENST00000612566 866 ntBASIC1.05□□□□□ -2.24
LTN1O94822 SDAD1P2-201ENST00000441308 2028 ntBASIC1.04□□□□□ -2.24
LTN1O94822 Z86062.1-201ENST00000406773 777 ntBASIC1.04□□□□□ -2.24
LTN1O94822 RPS15AP40-201ENST00000419621 391 ntBASIC1.04□□□□□ -2.24
LTN1O94822 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.04□□□□□ -2.24
LTN1O94822 EZH2P1-201ENST00000431167 291 ntBASIC1.04□□□□□ -2.24
LTN1O94822 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
LTN1O94822 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.04□□□□□ -2.24
LTN1O94822 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.04□□□□□ -2.24
LTN1O94822 SNRPGP16-201ENST00000533275 226 ntBASIC1.04□□□□□ -2.24
LTN1O94822 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.04□□□□□ -2.24
LTN1O94822 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.04□□□□□ -2.24
LTN1O94822 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.04□□□□□ -2.24
LTN1O94822 AC087359.1-201ENST00000508335 1740 ntBASIC1.04□□□□□ -2.24
LTN1O94822 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
LTN1O94822 MTND4P31-201ENST00000425607 1343 ntBASIC1.04□□□□□ -2.24
LTN1O94822 CBX3P1-201ENST00000325243 554 ntBASIC1.03□□□□□ -2.24
LTN1O94822 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
LTN1O94822 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
LTN1O94822 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
LTN1O94822 RNU6-837P-201ENST00000391056 108 ntBASIC1.03□□□□□ -2.24
LTN1O94822 RPL30P13-201ENST00000418873 348 ntBASIC1.03□□□□□ -2.24
LTN1O94822 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.03□□□□□ -2.24
LTN1O94822 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.03□□□□□ -2.24
LTN1O94822 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.03□□□□□ -2.24
LTN1O94822 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
LTN1O94822 MIR6513-201ENST00000621188 64 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms