Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
SNX3O60493 NCAPGP2-201ENST00000557911 754 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AC098848.2-201ENST00000588023 330 ntBASIC2.82□□□□□ -1.96
SNX3O60493 AC022893.3-201ENST00000607665 437 ntBASIC2.82□□□□□ -1.96
SNX3O60493 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SNX3O60493 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNX3O60493 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNX3O60493 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNX3O60493 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
SNX3O60493 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SNX3O60493 AC010680.1-201ENST00000590024 3590 ntBASIC2.81□□□□□ -1.96
SNX3O60493 RNU6-181P-201ENST00000363225 107 ntBASIC2.81□□□□□ -1.96
SNX3O60493 RNU6-884P-201ENST00000363889 107 ntBASIC2.81□□□□□ -1.96
SNX3O60493 CD24P4-201ENST00000382840 243 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AL663109.1-201ENST00000411498 844 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX3O60493 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX3O60493 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX3O60493 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.81□□□□□ -1.96
SNX3O60493 MTCO3P5-201ENST00000433620 714 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AL591212.2-201ENST00000433923 257 ntBASIC2.81□□□□□ -1.96
SNX3O60493 GPR143P-201ENST00000434155 205 ntBASIC2.81□□□□□ -1.96
SNX3O60493 MTATP6P16-201ENST00000434543 526 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AC007389.2-201ENST00000434630 306 ntBASIC2.81□□□□□ -1.96
SNX3O60493 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.81□□□□□ -1.96
SNX3O60493 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.81□□□□□ -1.96
SNX3O60493 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.81□□□□□ -1.96
SNX3O60493 C1DP4-201ENST00000455429 424 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX3O60493 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX3O60493 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.81□□□□□ -1.96
SNX3O60493 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.81□□□□□ -1.96
SNX3O60493 ARL4AP2-201ENST00000507378 601 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AC117522.1-201ENST00000509821 380 ntBASIC2.81□□□□□ -1.96
SNX3O60493 MTND4LP31-201ENST00000514859 294 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX3O60493 Y_RNA.689-201ENST00000516589 107 ntBASIC2.81□□□□□ -1.96
SNX3O60493 RNU6-445P-201ENST00000516949 107 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX3O60493 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.81□□□□□ -1.96
SNX3O60493 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX3O60493 AL391261.3-201ENST00000557194 520 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX3O60493 AL391840.1-201ENST00000571144 367 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AC024619.4-201ENST00000580924 316 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AC103987.3-201ENST00000582071 292 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AC087683.1-201ENST00000591187 441 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AC073648.5-201ENST00000603502 305 ntBASIC2.81□□□□□ -1.96
SNX3O60493 NUTF2P8-201ENST00000604593 363 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AL161629.2-201ENST00000615347 275 ntBASIC2.81□□□□□ -1.96
SNX3O60493 AC010297.1-201ENST00000623948 149 ntBASIC2.81□□□□□ -1.96
SNX3O60493 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.81□□□□□ -1.96
SNX3O60493 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNX3O60493 AC092593.1-201ENST00000515413 1815 ntBASIC2.81□□□□□ -1.96
SNX3O60493 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.81□□□□□ -1.96
SNX3O60493 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNX3O60493 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SNX3O60493 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX3O60493 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SNX3O60493 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNX3O60493 RNA5SP479-201ENST00000364858 117 ntBASIC2.8□□□□□ -1.96
SNX3O60493 RNU1-64P-201ENST00000365443 163 ntBASIC2.8□□□□□ -1.96
SNX3O60493 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SNX3O60493 OR5H15-201ENST00000383696 930 ntBASIC2.8□□□□□ -1.96
SNX3O60493 RNU6-190P-201ENST00000384154 102 ntBASIC2.8□□□□□ -1.96
SNX3O60493 SNORA24.1-201ENST00000384401 135 ntBASIC2.8□□□□□ -1.96
SNX3O60493 Y_RNA.559-201ENST00000384686 107 ntBASIC2.8□□□□□ -1.96
SNX3O60493 AL512633.1-201ENST00000399931 655 ntBASIC2.8□□□□□ -1.96
SNX3O60493 RNU6ATAC-201ENST00000408749 126 ntBASIC2.8□□□□□ -1.96
SNX3O60493 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX3O60493 RPL7P10-201ENST00000417407 739 ntBASIC2.8□□□□□ -1.96
SNX3O60493 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX3O60493 DLGAP5P1-201ENST00000430307 464 ntBASIC2.8□□□□□ -1.96
SNX3O60493 RPL36AP53-201ENST00000432891 316 ntBASIC2.8□□□□□ -1.96
SNX3O60493 GOT2P5-201ENST00000433995 546 ntBASIC2.8□□□□□ -1.96
SNX3O60493 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.8□□□□□ -1.96
SNX3O60493 RPS20P5-201ENST00000434808 360 ntBASIC2.8□□□□□ -1.96
SNX3O60493 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SNX3O60493 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX3O60493 FABP5P13-201ENST00000452144 328 ntBASIC2.8□□□□□ -1.96
SNX3O60493 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX3O60493 AC109925.1-201ENST00000478069 331 ntBASIC2.8□□□□□ -1.96
SNX3O60493 RPS29P20-201ENST00000489592 171 ntBASIC2.8□□□□□ -1.96
SNX3O60493 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SNX3O60493 AC108078.2-201ENST00000510750 236 ntBASIC2.8□□□□□ -1.96
SNX3O60493 RNU6-405P-201ENST00000516637 110 ntBASIC2.8□□□□□ -1.96
SNX3O60493 RNU6-410P-201ENST00000517006 107 ntBASIC2.8□□□□□ -1.96
SNX3O60493 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.8□□□□□ -1.96
SNX3O60493 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.8□□□□□ -1.96
SNX3O60493 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX3O60493 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNX3O60493 AP003072.2-201ENST00000527756 676 ntBASIC2.8□□□□□ -1.96
SNX3O60493 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX3O60493 AC007458.1-201ENST00000542812 373 ntBASIC2.8□□□□□ -1.96
SNX3O60493 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX3O60493 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX3O60493 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.8□□□□□ -1.96
SNX3O60493 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX3O60493 MTCYBP33-201ENST00000575007 1130 ntBASIC2.8□□□□□ -1.96
SNX3O60493 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms