Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
PRICKLE3O43900 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.16□□□□□ -1.74
PRICKLE3O43900 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PRICKLE3O43900 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRICKLE3O43900 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRICKLE3O43900 PABPC1P7-201ENST00000413177 1513 ntBASIC4.16□□□□□ -1.74
PRICKLE3O43900 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRICKLE3O43900 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
PRICKLE3O43900 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PRICKLE3O43900 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRICKLE3O43900 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRICKLE3O43900 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.15□□□□□ -1.74
PRICKLE3O43900 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRICKLE3O43900 Y_RNA.577-201ENST00000384794 101 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 SNORD58.1-201ENST00000391313 66 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 AL138885.1-201ENST00000405921 675 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 MIR548H3-201ENST00000408771 118 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 RNA5SP107-201ENST00000411358 122 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 AC097713.2-201ENST00000430199 356 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 AL158071.1-201ENST00000430315 461 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 AL359672.1-201ENST00000442302 409 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 RPS3AP12-201ENST00000443616 753 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 ABCF2P2-201ENST00000450549 296 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 MTCO3P8-201ENST00000453691 755 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 RPL23AP81-201ENST00000455252 467 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 HIGD1AP3-201ENST00000515857 278 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 RNA5SP49-201ENST00000516450 115 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 RNU6-798P-201ENST00000516912 103 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 AC022868.1-201ENST00000517767 391 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 AL138889.2-201ENST00000603883 242 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 ARF4P1-201ENST00000605447 541 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 AL590099.1-201ENST00000615276 138 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 AC091925.2-201ENST00000625059 256 ntBASIC4.15□□□□□ -1.75
PRICKLE3O43900 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRICKLE3O43900 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRICKLE3O43900 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.15□□□□□ -1.75
PRICKLE3O43900 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
PRICKLE3O43900 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRICKLE3O43900 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRICKLE3O43900 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PRICKLE3O43900 RNU1-14P-201ENST00000362759 152 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 RNU6-280P-201ENST00000364145 104 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 SNORA23-201ENST00000365128 182 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.14□□□□□ -1.75
PRICKLE3O43900 RNU6-434P-201ENST00000384376 107 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 Y_RNA.526-201ENST00000384572 110 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 RPL21P109-201ENST00000422213 475 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.14□□□□□ -1.75
PRICKLE3O43900 AC004383.1-201ENST00000438135 289 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 RPL23AP33-201ENST00000442301 452 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRICKLE3O43900 RPL29P29-201ENST00000448725 423 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 TRBVB-201ENST00000477100 408 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 RPL17P19-201ENST00000489069 552 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 AC104164.2-201ENST00000496953 495 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 RPL23AP55-201ENST00000498163 452 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 AL592156.1-201ENST00000508758 304 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 MTCO3P44-201ENST00000510977 541 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 AC008958.1-201ENST00000511047 682 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 SNORA31.9-201ENST00000516429 84 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 Y_RNA.703-201ENST00000516846 111 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.14□□□□□ -1.75
PRICKLE3O43900 AL133271.1-201ENST00000538229 291 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 AC006064.5-201ENST00000541782 248 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.14□□□□□ -1.75
PRICKLE3O43900 AC104763.2-201ENST00000604179 382 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRICKLE3O43900 FAM27D1-201ENST00000612308 341 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 AC127459.3-201ENST00000624328 466 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 MIR3653-201ENST00000625572 110 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.14□□□□□ -1.75
PRICKLE3O43900 AC006971.1-201ENST00000407916 4486 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRICKLE3O43900 MAPK10-320ENST00000641462 6696 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRICKLE3O43900 AL359893.1-201ENST00000447628 1580 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PRICKLE3O43900 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.14□□□□□ -1.75
PRICKLE3O43900 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRICKLE3O43900 AC027290.2-201ENST00000623210 18662 ntBASIC4.14□□□□□ -1.75
PRICKLE3O43900 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRICKLE3O43900 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRICKLE3O43900 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRICKLE3O43900 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRICKLE3O43900 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRICKLE3O43900 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms