Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 U2.10-201ENST00000620268 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 MIR6837-201ENST00000620884 64 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
ACTN4O43707 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.68□□□□□ -1.5
ACTN4O43707 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.68□□□□□ -1.5
ACTN4O43707 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ACTN4O43707 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ACTN4O43707 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ACTN4O43707 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ACTN4O43707 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ACTN4O43707 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ACTN4O43707 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.67□□□□□ -1.5
ACTN4O43707 AC093591.2-201ENST00000565254 3843 ntBASIC5.67□□□□□ -1.5
ACTN4O43707 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
ACTN4O43707 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
ACTN4O43707 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ACTN4O43707 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ACTN4O43707 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ACTN4O43707 Y_RNA.182-201ENST00000363880 111 ntBASIC5.67□□□□□ -1.5
ACTN4O43707 RN7SKP113-201ENST00000363891 295 ntBASIC5.67□□□□□ -1.5
ACTN4O43707 RNU1-43P-201ENST00000365052 165 ntBASIC5.67□□□□□ -1.5
ACTN4O43707 RNU6-80P-201ENST00000384195 107 ntBASIC5.67□□□□□ -1.5
ACTN4O43707 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.67□□□□□ -1.5
ACTN4O43707 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.67□□□□□ -1.5
ACTN4O43707 MTND4LP9-201ENST00000427694 174 ntBASIC5.67□□□□□ -1.5
ACTN4O43707 AL512844.2-201ENST00000433990 593 ntBASIC5.67□□□□□ -1.5
ACTN4O43707 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.67□□□□□ -1.5
ACTN4O43707 RPL21P13-201ENST00000488305 481 ntBASIC5.67□□□□□ -1.5
ACTN4O43707 IGKV2-18-201ENST00000522607 343 ntBASIC5.67□□□□□ -1.5
ACTN4O43707 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.67□□□□□ -1.5
ACTN4O43707 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.67□□□□□ -1.5
ACTN4O43707 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.67□□□□□ -1.5
ACTN4O43707 AC015914.2-201ENST00000618167 288 ntBASIC5.67□□□□□ -1.5
ACTN4O43707 AL049767.1-202ENST00000637826 242 ntBASIC5.67□□□□□ -1.5
ACTN4O43707 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ACTN4O43707 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ACTN4O43707 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ACTN4O43707 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.67□□□□□ -1.5
ACTN4O43707 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
ACTN4O43707 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ACTN4O43707 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ACTN4O43707 AC009541.1-201ENST00000438279 2662 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 Y_RNA.75-201ENST00000362927 97 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 SNORA17.1-201ENST00000362945 126 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 RNA5SP435-201ENST00000364044 108 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 SNORD115-32-201ENST00000364079 82 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 RNU6-336P-201ENST00000364891 107 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 AL357075.1-201ENST00000404107 726 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.66□□□□□ -1.5
ACTN4O43707 RAB28P5-201ENST00000427490 651 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.66□□□□□ -1.5
ACTN4O43707 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.66□□□□□ -1.5
ACTN4O43707 AL391987.1-201ENST00000441025 200 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 PPIAP21-201ENST00000464473 501 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 RN7SL174P-201ENST00000475578 289 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 RPS21P4-201ENST00000487122 248 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 PDCD5P2-201ENST00000507570 312 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 RNA5SP170-201ENST00000517150 101 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.66□□□□□ -1.5
ACTN4O43707 AC005868.1-201ENST00000536421 331 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.66□□□□□ -1.5
ACTN4O43707 AC055872.1-201ENST00000570978 278 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.66□□□□□ -1.5
ACTN4O43707 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.66□□□□□ -1.5
ACTN4O43707 AC002545.1-201ENST00000592511 181 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.66□□□□□ -1.5
ACTN4O43707 AL161798.1-201ENST00000604630 131 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 AC068831.7-201ENST00000616954 363 ntBASIC5.66□□□□□ -1.5
ACTN4O43707 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.66□□□□□ -1.5
ACTN4O43707 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ACTN4O43707 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.66□□□□□ -1.5
ACTN4O43707 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ACTN4O43707 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.66□□□□□ -1.5
ACTN4O43707 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ACTN4O43707 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.65□□□□□ -1.5
ACTN4O43707 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.65□□□□□ -1.5
ACTN4O43707 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN4O43707 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN4O43707 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN4O43707 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN4O43707 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.65□□□□□ -1.5
ACTN4O43707 MIR323A-201ENST00000362199 86 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 RNU6-1255P-201ENST00000363434 112 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 MIR34A-201ENST00000385130 110 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 MIR153-2-201ENST00000385225 87 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 RNA5SP213-201ENST00000391031 106 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN4O43707 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.65□□□□□ -1.5
ACTN4O43707 COX6B1P7-201ENST00000430845 235 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 RNU6-1211P-201ENST00000459179 105 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 BX510359.5-201ENST00000515651 304 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.65□□□□□ -1.5
ACTN4O43707 AP000859.1-201ENST00000525536 307 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ACTN4O43707 AP002001.1-203ENST00000534002 267 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.65□□□□□ -1.5
ACTN4O43707 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.65□□□□□ -1.5
ACTN4O43707 AC005296.1-201ENST00000616145 209 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 AC074140.1-201ENST00000621617 208 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 snoU18.1-201ENST00000629629 71 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms