Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.58□□□□□ -2
CLDN3O15551 RPL36AP53-201ENST00000432891 316 ntBASIC2.58□□□□□ -2
CLDN3O15551 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.58□□□□□ -2
CLDN3O15551 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.58□□□□□ -2
CLDN3O15551 AC108059.3-201ENST00000456388 214 ntBASIC2.58□□□□□ -2
CLDN3O15551 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.58□□□□□ -2
CLDN3O15551 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.58□□□□□ -2
CLDN3O15551 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.58□□□□□ -2
CLDN3O15551 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
CLDN3O15551 AL512310.1-201ENST00000548639 172 ntBASIC2.58□□□□□ -2
CLDN3O15551 AL049838.1-201ENST00000563647 981 ntBASIC2.58□□□□□ -2
CLDN3O15551 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.58□□□□□ -2
CLDN3O15551 AC009163.5-201ENST00000575421 637 ntBASIC2.58□□□□□ -2
CLDN3O15551 MIR3616-201ENST00000584070 92 ntBASIC2.58□□□□□ -2
CLDN3O15551 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.58□□□□□ -2
CLDN3O15551 AL139418.1-201ENST00000613613 177 ntBASIC2.58□□□□□ -2
CLDN3O15551 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.58□□□□□ -2
CLDN3O15551 AC091965.5-201ENST00000624785 342 ntBASIC2.58□□□□□ -2
CLDN3O15551 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
CLDN3O15551 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.57□□□□□ -2
CLDN3O15551 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLDN3O15551 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CLDN3O15551 TAS2R15P-201ENST00000390674 928 ntBASIC2.57□□□□□ -2
CLDN3O15551 RNA5SP508-201ENST00000411327 119 ntBASIC2.57□□□□□ -2
CLDN3O15551 RPL26P27-201ENST00000414397 437 ntBASIC2.57□□□□□ -2
CLDN3O15551 SSR1P2-201ENST00000415208 787 ntBASIC2.57□□□□□ -2
CLDN3O15551 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.57□□□□□ -2
CLDN3O15551 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.57□□□□□ -2
CLDN3O15551 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.57□□□□□ -2
CLDN3O15551 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.57□□□□□ -2
CLDN3O15551 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.57□□□□□ -2
CLDN3O15551 MYL8P-204ENST00000431574 518 ntBASIC2.57□□□□□ -2
CLDN3O15551 AC098831.1-201ENST00000440661 216 ntBASIC2.57□□□□□ -2
CLDN3O15551 CR769776.1-201ENST00000441254 787 ntBASIC2.57□□□□□ -2
CLDN3O15551 HIGD1AP2-201ENST00000446367 280 ntBASIC2.57□□□□□ -2
CLDN3O15551 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.57□□□□□ -2
CLDN3O15551 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.57□□□□□ -2
CLDN3O15551 RNU7-26P-201ENST00000458980 63 ntBASIC2.57□□□□□ -2
CLDN3O15551 AP000852.1-201ENST00000472460 573 ntBASIC2.57□□□□□ -2
CLDN3O15551 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLDN3O15551 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.57□□□□□ -2
CLDN3O15551 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.57□□□□□ -2
CLDN3O15551 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.57□□□□□ -2
CLDN3O15551 AC007151.1-201ENST00000572774 483 ntBASIC2.57□□□□□ -2
CLDN3O15551 MIR5194-201ENST00000582634 120 ntBASIC2.57□□□□□ -2
CLDN3O15551 MIR4293-201ENST00000584305 78 ntBASIC2.57□□□□□ -2
CLDN3O15551 BCRP9-201ENST00000605312 388 ntBASIC2.57□□□□□ -2
CLDN3O15551 AL137847.3-201ENST00000611521 109 ntBASIC2.57□□□□□ -2
CLDN3O15551 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.57□□□□□ -2
CLDN3O15551 AC080128.1-201ENST00000474389 1917 ntBASIC2.57□□□□□ -2
CLDN3O15551 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.57□□□□□ -2
CLDN3O15551 MTND4P16-201ENST00000466108 1367 ntBASIC2.57□□□□□ -2
CLDN3O15551 ZNF876P-202ENST00000398732 1485 ntBASIC2.57□□□□□ -2
CLDN3O15551 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLDN3O15551 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CLDN3O15551 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.56□□□□□ -2
CLDN3O15551 ADAM3A-203ENST00000461344 2157 ntBASIC2.56□□□□□ -2
CLDN3O15551 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLDN3O15551 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLDN3O15551 MIR21-201ENST00000362134 72 ntBASIC2.56□□□□□ -2
CLDN3O15551 RNU6-778P-201ENST00000363269 103 ntBASIC2.56□□□□□ -2
CLDN3O15551 RNU6-658P-201ENST00000384606 106 ntBASIC2.56□□□□□ -2
CLDN3O15551 RNU6-1072P-201ENST00000384703 107 ntBASIC2.56□□□□□ -2
CLDN3O15551 RNU6-443P-201ENST00000384780 107 ntBASIC2.56□□□□□ -2
CLDN3O15551 AL139397.2-201ENST00000404529 772 ntBASIC2.56□□□□□ -2
CLDN3O15551 AL021407.1-201ENST00000404531 386 ntBASIC2.56□□□□□ -2
CLDN3O15551 NDUFS5P1-201ENST00000405668 289 ntBASIC2.56□□□□□ -2
CLDN3O15551 RNU4-53P-201ENST00000410828 140 ntBASIC2.56□□□□□ -2
CLDN3O15551 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.56□□□□□ -2
CLDN3O15551 LARP1BP3-201ENST00000437229 869 ntBASIC2.56□□□□□ -2
CLDN3O15551 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.56□□□□□ -2
CLDN3O15551 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.56□□□□□ -2
CLDN3O15551 AC027673.1-201ENST00000456245 405 ntBASIC2.56□□□□□ -2
CLDN3O15551 AL121769.1-201ENST00000469473 401 ntBASIC2.56□□□□□ -2
CLDN3O15551 RPL23AP41-201ENST00000484754 458 ntBASIC2.56□□□□□ -2
CLDN3O15551 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.56□□□□□ -2
CLDN3O15551 SNORA31.15-201ENST00000516771 132 ntBASIC2.56□□□□□ -2
CLDN3O15551 BTF3P12-201ENST00000519620 469 ntBASIC2.56□□□□□ -2
CLDN3O15551 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.56□□□□□ -2
CLDN3O15551 MTATP6P15-201ENST00000527233 835 ntBASIC2.56□□□□□ -2
CLDN3O15551 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.56□□□□□ -2
CLDN3O15551 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.56□□□□□ -2
CLDN3O15551 AL645944.1-201ENST00000603857 493 ntBASIC2.56□□□□□ -2
CLDN3O15551 AL031281.1-201ENST00000604049 488 ntBASIC2.56□□□□□ -2
CLDN3O15551 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
CLDN3O15551 AC090970.3-201ENST00000612566 866 ntBASIC2.56□□□□□ -2
CLDN3O15551 DUSP12P1-201ENST00000612874 516 ntBASIC2.56□□□□□ -2
CLDN3O15551 AP002791.1-201ENST00000623291 381 ntBASIC2.56□□□□□ -2
CLDN3O15551 AC079416.3-201ENST00000624479 549 ntBASIC2.56□□□□□ -2
CLDN3O15551 U2.21-201ENST00000637295 81 ntBASIC2.56□□□□□ -2
CLDN3O15551 AL137003.2-201ENST00000606924 2538 ntBASIC2.56□□□□□ -2
CLDN3O15551 RNU6-1284P-201ENST00000363701 100 ntBASIC2.55□□□□□ -2
CLDN3O15551 RNU1-51P-201ENST00000365345 176 ntBASIC2.55□□□□□ -2
CLDN3O15551 RNU6-1083P-201ENST00000384022 107 ntBASIC2.55□□□□□ -2
CLDN3O15551 RNU6-253P-201ENST00000384730 105 ntBASIC2.55□□□□□ -2
CLDN3O15551 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.55□□□□□ -2
CLDN3O15551 RNU6-1328P-201ENST00000410938 106 ntBASIC2.55□□□□□ -2
CLDN3O15551 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.55□□□□□ -2
CLDN3O15551 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.55□□□□□ -2
CLDN3O15551 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms