Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.34□□□□□ -2.19
HMGB3O15347 AC009974.1-201ENST00000608881 455 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 Z99571.1-201ENST00000636677 394 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 AC087821.2-201ENST00000637086 450 ntBASIC1.34□□□□□ -2.19
HMGB3O15347 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.2
HMGB3O15347 AL138713.1-201ENST00000624026 2130 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
HMGB3O15347 RPL7P27-201ENST00000403775 720 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AL158050.1-201ENST00000416077 457 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGB3O15347 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.33□□□□□ -2.2
HMGB3O15347 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGB3O15347 AL160275.3-201ENST00000423876 471 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGB3O15347 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGB3O15347 MTND2P29-201ENST00000438595 412 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 PTGES3P1-201ENST00000439531 483 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AL161651.1-201ENST00000440882 223 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AL161788.1-201ENST00000441805 169 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AC096638.1-201ENST00000444678 216 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGB3O15347 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HMGB3O15347 FABP5P13-201ENST00000452144 328 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.33□□□□□ -2.2
HMGB3O15347 CYP2C59P-201ENST00000457790 269 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AP001324.2-201ENST00000461163 319 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HMGB3O15347 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.33□□□□□ -2.2
HMGB3O15347 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGB3O15347 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGB3O15347 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.33□□□□□ -2.2
HMGB3O15347 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.33□□□□□ -2.2
HMGB3O15347 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGB3O15347 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
HMGB3O15347 ROCK1P1-201ENST00000573767 549 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AC090615.1-201ENST00000577519 154 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AC124283.4-201ENST00000581815 456 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.33□□□□□ -2.2
HMGB3O15347 AL035411.2-201ENST00000604022 421 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AC068944.2-201ENST00000610373 403 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 AL392048.1-201ENST00000613946 534 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 HPVC1-201ENST00000629899 1198 ntBASIC1.33□□□□□ -2.2
HMGB3O15347 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMGB3O15347 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMGB3O15347 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
HMGB3O15347 AL033519.2-201ENST00000403958 392 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HMGB3O15347 MTCYBP38-201ENST00000417160 1123 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.32□□□□□ -2.2
HMGB3O15347 ELOCP14-201ENST00000428070 331 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 NANOGP2-201ENST00000435391 727 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 RSU1P2-202ENST00000437884 485 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 ELOCP7-201ENST00000439968 331 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 AC018868.1-201ENST00000491307 315 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 AC018437.1-201ENST00000492214 406 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 RPL22P13-201ENST00000493291 347 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGB3O15347 AC008837.1-201ENST00000511513 412 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
HMGB3O15347 SMURF2P1-201ENST00000514992 481 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 RNU1-103P-201ENST00000516502 125 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.32□□□□□ -2.2
HMGB3O15347 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGB3O15347 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGB3O15347 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.32□□□□□ -2.2
HMGB3O15347 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HMGB3O15347 MIR4637-201ENST00000582405 84 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 BNIP3P23-201ENST00000599655 511 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 AP001485.1-201ENST00000604799 199 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 MIR502-201ENST00000606349 86 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 AF129408.1-201ENST00000608767 431 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
HMGB3O15347 AC079416.3-201ENST00000624479 549 ntBASIC1.32□□□□□ -2.2
HMGB3O15347 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMGB3O15347 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HMGB3O15347 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
HMGB3O15347 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.31□□□□□ -2.2
HMGB3O15347 RNU1-42P-201ENST00000364033 160 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 SNORA25B-201ENST00000365507 128 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 RNU6-481P-201ENST00000384194 107 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 CISD1P1-201ENST00000393907 327 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 SNRPEP2-201ENST00000397592 279 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 TAF13P2-201ENST00000416876 286 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 AC097463.2-201ENST00000421074 142 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 MTCYBP32-201ENST00000427945 1084 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
HMGB3O15347 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.31□□□□□ -2.2
HMGB3O15347 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
HMGB3O15347 RNA5SP290-201ENST00000517133 127 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 AC034114.1-201ENST00000520293 285 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 AC022861.1-201ENST00000522981 663 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 MTCO2P15-201ENST00000532655 656 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
HMGB3O15347 MIR3167-201ENST00000579623 85 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.31□□□□□ -2.2
HMGB3O15347 AP002906.1-201ENST00000603405 233 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 MTCYBP22-201ENST00000603788 447 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 AL390208.1-201ENST00000605885 644 ntBASIC1.31□□□□□ -2.2
HMGB3O15347 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGB3O15347 AC239803.2-201ENST00000610161 430 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms