Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL513043.1-201ENST00000439124 535 ntBASIC4.8□□□□□ -1.64
SOX1O00570 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX1O00570 PRELID3BP1-201ENST00000457142 540 ntBASIC4.8□□□□□ -1.64
SOX1O00570 RPL9P9-202ENST00000466501 579 ntBASIC4.8□□□□□ -1.64
SOX1O00570 RPL7P5-201ENST00000471472 736 ntBASIC4.8□□□□□ -1.64
SOX1O00570 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX1O00570 APOOP4-201ENST00000513530 597 ntBASIC4.8□□□□□ -1.64
SOX1O00570 RNU6-927P-201ENST00000516199 100 ntBASIC4.8□□□□□ -1.64
SOX1O00570 RNU6-143P-201ENST00000516942 93 ntBASIC4.8□□□□□ -1.64
SOX1O00570 AC026403.1-201ENST00000518938 295 ntBASIC4.8□□□□□ -1.64
SOX1O00570 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.8□□□□□ -1.64
SOX1O00570 AC068446.3-201ENST00000555285 382 ntBASIC4.8□□□□□ -1.64
SOX1O00570 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX1O00570 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.8□□□□□ -1.64
SOX1O00570 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX1O00570 MIR5696-201ENST00000578474 85 ntBASIC4.8□□□□□ -1.64
SOX1O00570 MIR1273C-201ENST00000578669 77 ntBASIC4.8□□□□□ -1.64
SOX1O00570 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX1O00570 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX1O00570 RMST_4.1-201ENST00000616886 107 ntBASIC4.8□□□□□ -1.64
SOX1O00570 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX1O00570 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX1O00570 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
SOX1O00570 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX1O00570 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX1O00570 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX1O00570 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SOX1O00570 AC104260.2-201ENST00000623551 3497 ntBASIC4.8□□□□□ -1.64
SOX1O00570 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX1O00570 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX1O00570 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SOX1O00570 RNU1-76P-201ENST00000362903 159 ntBASIC4.79□□□□□ -1.64
SOX1O00570 Y_RNA.180-201ENST00000363867 113 ntBASIC4.79□□□□□ -1.64
SOX1O00570 RNU6-595P-201ENST00000363944 107 ntBASIC4.79□□□□□ -1.64
SOX1O00570 RNU6-338P-201ENST00000383888 105 ntBASIC4.79□□□□□ -1.64
SOX1O00570 RNU2-25P-201ENST00000411041 191 ntBASIC4.79□□□□□ -1.64
SOX1O00570 AC079809.1-201ENST00000415468 276 ntBASIC4.79□□□□□ -1.64
SOX1O00570 AL096701.2-201ENST00000416920 238 ntBASIC4.79□□□□□ -1.64
SOX1O00570 EIF4EP2-201ENST00000422816 654 ntBASIC4.79□□□□□ -1.64
SOX1O00570 USP9YP7-201ENST00000436723 430 ntBASIC4.79□□□□□ -1.64
SOX1O00570 NDUFB1P2-201ENST00000449477 176 ntBASIC4.79□□□□□ -1.64
SOX1O00570 USP9YP32-201ENST00000452432 430 ntBASIC4.79□□□□□ -1.64
SOX1O00570 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX1O00570 AL049873.1-201ENST00000480540 376 ntBASIC4.79□□□□□ -1.64
SOX1O00570 SNORD116-26-201ENST00000516006 96 ntBASIC4.79□□□□□ -1.64
SOX1O00570 MIR892C-201ENST00000516410 77 ntBASIC4.79□□□□□ -1.64
SOX1O00570 RNA5SP49-201ENST00000516450 115 ntBASIC4.79□□□□□ -1.64
SOX1O00570 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX1O00570 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX1O00570 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX1O00570 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.79□□□□□ -1.64
SOX1O00570 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX1O00570 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX1O00570 AMZ2P1-203ENST00000565833 850 ntBASIC4.79□□□□□ -1.64
SOX1O00570 AC005951.2-201ENST00000576282 495 ntBASIC4.79□□□□□ -1.64
SOX1O00570 AL606490.9-201ENST00000603331 271 ntBASIC4.79□□□□□ -1.64
SOX1O00570 AC010201.1-201ENST00000605051 540 ntBASIC4.79□□□□□ -1.64
SOX1O00570 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX1O00570 Z99571.1-201ENST00000636677 394 ntBASIC4.79□□□□□ -1.64
SOX1O00570 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX1O00570 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SOX1O00570 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX1O00570 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX1O00570 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SOX1O00570 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX1O00570 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SOX1O00570 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX1O00570 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX1O00570 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX1O00570 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX1O00570 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SOX1O00570 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX1O00570 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SOX1O00570 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX1O00570 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX1O00570 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SOX1O00570 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX1O00570 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX1O00570 MAPK10-349ENST00000641767 3661 ntBASIC4.78□□□□□ -1.64
SOX1O00570 UBE2L2-201ENST00000254302 429 ntBASIC4.78□□□□□ -1.64
SOX1O00570 AL157777.2-201ENST00000258070 137 ntBASIC4.78□□□□□ -1.64
SOX1O00570 MIR335-201ENST00000362173 94 ntBASIC4.78□□□□□ -1.64
SOX1O00570 SNORD27-201ENST00000363981 72 ntBASIC4.78□□□□□ -1.64
SOX1O00570 RNU6-1317P-201ENST00000364582 104 ntBASIC4.78□□□□□ -1.64
SOX1O00570 MIR301A-201ENST00000385261 86 ntBASIC4.78□□□□□ -1.64
SOX1O00570 SDHCP2-201ENST00000398565 501 ntBASIC4.78□□□□□ -1.64
SOX1O00570 Y_RNA.592-201ENST00000410274 109 ntBASIC4.78□□□□□ -1.64
SOX1O00570 RNU6-1203P-201ENST00000410703 110 ntBASIC4.78□□□□□ -1.64
SOX1O00570 AC096920.1-201ENST00000423991 241 ntBASIC4.78□□□□□ -1.64
SOX1O00570 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX1O00570 RPEP5-201ENST00000441137 268 ntBASIC4.78□□□□□ -1.64
SOX1O00570 AC073587.1-201ENST00000447093 876 ntBASIC4.78□□□□□ -1.64
SOX1O00570 RPL29P29-201ENST00000448725 423 ntBASIC4.78□□□□□ -1.64
SOX1O00570 AC087588.1-201ENST00000462203 316 ntBASIC4.78□□□□□ -1.64
SOX1O00570 MED28P2-201ENST00000475771 317 ntBASIC4.78□□□□□ -1.64
SOX1O00570 AC022493.1-201ENST00000492984 337 ntBASIC4.78□□□□□ -1.64
SOX1O00570 SUMO2P6-201ENST00000505273 288 ntBASIC4.78□□□□□ -1.64
SOX1O00570 HMGN1P11-201ENST00000508668 303 ntBASIC4.78□□□□□ -1.64
SOX1O00570 AC074250.1-201ENST00000511117 192 ntBASIC4.78□□□□□ -1.64
SOX1O00570 Y_RNA.719-201ENST00000517156 106 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms