Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RNU6-658P-201ENST00000384606 106 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 MIR1289-1-201ENST00000408836 144 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC188H7C350 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CCDC188H7C350 AC009414.1-201ENST00000427200 443 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC188H7C350 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC188H7C350 GTF2IP20-201ENST00000431663 360 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC188H7C350 RPS24P1-201ENST00000438550 371 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC188H7C350 TAF9P1-201ENST00000445421 515 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.92□□□□□ -1.94
CCDC188H7C350 TAF9P2-201ENST00000454958 515 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AC009901.1-201ENST00000506703 541 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AC117522.3-201ENST00000507974 584 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 SNORA31.26-201ENST00000517250 137 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC188H7C350 MTND2P38-201ENST00000522536 667 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 PSMA2P1-201ENST00000526365 646 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC188H7C350 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC188H7C350 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC188H7C350 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
CCDC188H7C350 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC188H7C350 H3F3AP1-201ENST00000559984 334 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 MIR5004-201ENST00000579078 107 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AC011471.1-201ENST00000585766 187 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC188H7C350 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC188H7C350 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC188H7C350 AC078899.3-201ENST00000599065 212 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AL161734.1-201ENST00000609720 557 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 AC099654.13-201ENST00000639774 207 ntBASIC2.92□□□□□ -1.94
CCDC188H7C350 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC188H7C350 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC188H7C350 ADAM3A-203ENST00000461344 2157 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 AL359693.1-201ENST00000614959 2407 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC188H7C350 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC188H7C350 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC188H7C350 AC093010.3-201ENST00000570269 15214 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC188H7C350 FGF7P2-201ENST00000332473 296 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 RNU4-21P-201ENST00000362802 126 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 Y_RNA.201-201ENST00000364052 96 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CCDC188H7C350 SNORA20.2-201ENST00000383922 131 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 RPL23AP32-201ENST00000395315 459 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 RPS3AP3-201ENST00000411933 242 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 RPL26P27-201ENST00000414397 437 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC188H7C350 AL033528.1-201ENST00000453780 140 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC188H7C350 RN7SL601P-201ENST00000471221 293 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 RPS15AP34-201ENST00000487776 387 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC188H7C350 SNORA31.3-201ENST00000516029 96 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 RNU1-103P-201ENST00000516502 125 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC188H7C350 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC188H7C350 AP003122.4-201ENST00000530980 758 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC188H7C350 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC188H7C350 ZNF861P-201ENST00000588126 639 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 AC020895.1-201ENST00000595362 272 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 SEPT7P9-203ENST00000604116 343 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 AL158032.1-201ENST00000605401 106 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC188H7C350 AC130324.3-201ENST00000614165 542 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 MIR7112-201ENST00000616126 65 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 AC026422.1-201ENST00000623961 452 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.91□□□□□ -1.94
CCDC188H7C350 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC188H7C350 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC188H7C350 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CCDC188H7C350 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CCDC188H7C350 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC188H7C350 U3.4-201ENST00000363352 213 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC188H7C350 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC188H7C350 RNU6-946P-201ENST00000383878 107 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 SNORD116-8-201ENST00000384365 95 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 SNORA26.7-201ENST00000391288 122 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC188H7C350 Z92545.1-201ENST00000411782 234 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 RPS12P24-201ENST00000412619 387 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 NDUFS5P4-201ENST00000412983 318 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AL158156.1-201ENST00000422509 473 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 AL353729.1-201ENST00000425044 720 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 HMGB1P9-201ENST00000429856 646 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 RPL21P2-201ENST00000440049 481 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 MTND1P27-201ENST00000451117 902 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC188H7C350 NIPA2P5-201ENST00000452282 464 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC188H7C350 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC188H7C350 SNORA59A-201ENST00000459326 152 ntBASIC2.9□□□□□ -1.95
CCDC188H7C350 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms