Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.27□□□□□ -1.89
LRRC53A6NM62 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC53A6NM62 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC53A6NM62 AL355596.1-201ENST00000565399 3996 ntBASIC3.27□□□□□ -1.89
LRRC53A6NM62 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC53A6NM62 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC53A6NM62 Y_RNA.245-201ENST00000364493 95 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 RNU6-61P-201ENST00000365528 109 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 AC068050.1-201ENST00000394891 380 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 AL356967.1-201ENST00000406305 431 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 MTATP6P18-201ENST00000417994 673 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 AC092017.2-201ENST00000427600 362 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.26□□□□□ -1.89
LRRC53A6NM62 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC53A6NM62 RPL36AP6-201ENST00000435770 321 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.26□□□□□ -1.89
LRRC53A6NM62 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC53A6NM62 FABP5P13-201ENST00000452144 328 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 RNU6-953P-201ENST00000459154 107 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC53A6NM62 SNORD27.1-201ENST00000516319 72 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 SNORA67.7-201ENST00000516664 135 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 RNU6-677P-201ENST00000516914 101 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC53A6NM62 MIR3609-201ENST00000582661 80 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 MIR3158-1-201ENST00000583596 81 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC53A6NM62 AL353743.1-202ENST00000431724 1695 ntBASIC3.26□□□□□ -1.89
LRRC53A6NM62 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC53A6NM62 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC53A6NM62 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC53A6NM62 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC53A6NM62 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC53A6NM62 RNU6-190P-201ENST00000384154 102 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 RNU6-1215P-201ENST00000384441 102 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 Y_RNA.516-201ENST00000384541 124 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 RNU1-101P-201ENST00000391171 127 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 SNORA48.8-201ENST00000391324 134 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AL353193.1-201ENST00000421444 268 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC53A6NM62 ELOCP14-201ENST00000428070 331 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC005326.1-201ENST00000429197 123 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AL592045.1-201ENST00000429867 352 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AL591212.2-201ENST00000433923 257 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 ELOCP7-201ENST00000439968 331 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 CECR9-201ENST00000453421 199 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 MRPS17P3-201ENST00000465453 385 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 RPL9P33-201ENST00000484311 566 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 RPL39P36-201ENST00000490784 156 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC079382.1-201ENST00000493346 557 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC108043.1-201ENST00000512696 574 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 OR4R1P-201ENST00000529879 463 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC016957.1-201ENST00000534895 309 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AMZ2P1-203ENST00000565833 850 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC006504.3-201ENST00000586818 523 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC174048.1-201ENST00000603389 144 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC022893.3-201ENST00000607665 437 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC006133.1-201ENST00000617106 264 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 AC025034.2-201ENST00000623264 286 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 MIR622-201ENST00000638396 96 ntBASIC3.25□□□□□ -1.89
LRRC53A6NM62 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
LRRC53A6NM62 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC53A6NM62 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC53A6NM62 MAPK10-362ENST00000641864 4484 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC53A6NM62 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC53A6NM62 FTLP6-201ENST00000355274 422 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 RNU6-179P-201ENST00000363350 107 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 SNORA62.1-201ENST00000364287 154 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 Y_RNA.409-201ENST00000383990 98 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 RNU6-217P-201ENST00000384164 104 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 RNU6-140P-201ENST00000384566 108 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 RNU6-1077P-201ENST00000410506 102 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 RNU4-47P-201ENST00000410876 114 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.24□□□□□ -1.89
LRRC53A6NM62 DDX3P2-201ENST00000446138 111 ntBASIC3.24□□□□□ -1.89
LRRC53A6NM62 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms