Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-1003P-201ENST00000517099 105 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 TRAV28-201ENST00000557548 323 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC105137.2-201ENST00000569073 466 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC060766.3-201ENST00000591442 263 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 OR10AB1P-201ENST00000609613 938 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC091304.6-201ENST00000619761 202 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC002064.3-201ENST00000623448 346 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 LRRC77P-213ENST00000637727 880 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 AC006927.3-201ENST00000638789 384 ntBASIC2.47□□□□□ -2.01
SMIM28A0A1B0GU29 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
SMIM28A0A1B0GU29 TPTE2P4-201ENST00000258589 1605 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-741P-201ENST00000383889 107 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 Y_RNA.560-201ENST00000384689 102 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AL139397.2-201ENST00000404529 772 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 RNU2-33P-201ENST00000410344 192 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 RNU6-920P-201ENST00000410926 92 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 USP9YP13-201ENST00000417797 480 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AC092447.3-201ENST00000426027 686 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 RPL37P21-201ENST00000435890 276 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 TIMM9P1-201ENST00000436122 256 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 MTCYBP39-201ENST00000437562 491 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AL445567.1-201ENST00000439121 144 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AL512286.1-201ENST00000439244 400 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 Z82210.1-201ENST00000440037 231 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 PIGFP3-201ENST00000441918 722 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 RPL39P40-201ENST00000445481 146 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 ELOCP30-201ENST00000447108 299 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AC020550.1-201ENST00000447385 163 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AL353705.4-201ENST00000449661 238 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 RPS20P22-201ENST00000473700 357 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 RPL30P6-201ENST00000475925 342 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 MTCYBP20-201ENST00000524239 1129 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 DEFB108A-201ENST00000530110 222 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 PCMTD1P2-201ENST00000565017 355 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AC109446.2-201ENST00000567872 497 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 MIR1273D-201ENST00000577266 86 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 MIR5697-201ENST00000578045 78 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AC020895.1-201ENST00000595362 272 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AL022161.1-201ENST00000604390 213 ntBASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.46□□□□□ -2.02
SMIM28A0A1B0GU29 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC010680.1-201ENST00000590024 3590 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 RNU1-91P-201ENST00000364746 163 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 RN7SKP192-201ENST00000411291 327 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AL513331.1-201ENST00000411908 397 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AL590383.1-201ENST00000428602 75 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 Z96811.1-201ENST00000445880 108 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 RN7SL499P-201ENST00000481141 276 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC010486.2-201ENST00000505572 483 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AP003467.2-201ENST00000520175 319 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC022616.6-201ENST00000520479 119 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 HMGN1P28-201ENST00000521340 364 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC107934.1-201ENST00000522215 217 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC087373.1-201ENST00000524920 491 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC007115.1-201ENST00000546853 234 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 SNRPGP18-201ENST00000553000 214 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC090888.1-201ENST00000561335 1141 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC026464.5-201ENST00000562497 722 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AL356575.1-201ENST00000603008 283 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 AC245517.5-201ENST00000611529 162 ntBASIC2.45□□□□□ -2.02
SMIM28A0A1B0GU29 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms