Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-250P-201ENST00000516958 103 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 SNORA31.23-201ENST00000517219 133 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 MIR4529-201ENST00000578110 78 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC022662.1-201ENST00000580252 331 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC105245.1-201ENST00000581934 244 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC010928.2-201ENST00000588017 287 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 OR4H6P-202ENST00000603819 340 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC068276.1-201ENST00000605793 379 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AL158211.4-201ENST00000606988 584 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AL121652.1-201ENST00000608851 448 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AL138478.1-201ENST00000612252 832 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 uc_338.14-201ENST00000613162 166 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 MIR6845-201ENST00000613182 61 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC008443.7-201ENST00000622195 246 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 ZNF72P-201ENST00000425869 1908 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 MTND4P23-201ENST00000447723 1363 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AL390862.1-201ENST00000635467 1469 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC103710.2-202ENST00000641454 2853 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-359P-201ENST00000365466 108 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-650P-201ENST00000365658 111 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 UBE2V1P15-201ENST00000407776 448 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 MIR1289-2-201ENST00000408360 111 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 RPS20P15-201ENST00000412792 311 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AL358453.1-201ENST00000422522 250 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 XKRYP1-201ENST00000423438 492 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 SKA2P1-201ENST00000425592 390 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 XKRYP2-201ENST00000432915 492 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AL691517.1-201ENST00000440833 1235 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 MOB1AP2-201ENST00000446060 614 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 GXYLT1P1-201ENST00000446657 490 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 SEPT14P24-201ENST00000447236 180 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 OFD1P3Y-201ENST00000453312 783 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 SSXP1-201ENST00000453640 473 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 snoU109.1-201ENST00000459339 135 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 HMGB1P36-201ENST00000487709 576 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AC020699.1-201ENST00000505161 445 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 MRPS33P3-201ENST00000513456 322 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 RNA5SP137-201ENST00000516833 135 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AC006518.2-201ENST00000542513 940 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 NACAP3-201ENST00000552100 481 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 CYCSP2-201ENST00000558168 301 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AC011494.1-201ENST00000596454 237 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AL035411.2-201ENST00000604022 421 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AC011451.2-201ENST00000604303 598 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AL355297.2-201ENST00000604792 129 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AP000238.1-201ENST00000608759 426 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AC024257.5-201ENST00000612739 531 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 AP002791.1-201ENST00000623291 381 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 MKKS-204ENST00000639674 192 ntBASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV3A0A0B4J244 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 UBE2L2-201ENST00000254302 429 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 AL356292.1-201ENST00000283110 373 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 SNRPEP3-201ENST00000338402 276 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-1159P-201ENST00000362933 107 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-216P-201ENST00000363282 104 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-748P-201ENST00000384648 107 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-1300P-201ENST00000391046 108 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 SNRPEP2-201ENST00000397592 279 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 POLHP1-201ENST00000411806 470 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 AL451054.2-201ENST00000420896 202 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 IFNA20P-201ENST00000436840 528 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 AC092902.1-201ENST00000486999 259 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 AC093677.1-201ENST00000514414 678 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 CBX3P7-201ENST00000532876 502 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 CBX3P4-201ENST00000538909 354 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 AC015712.3-201ENST00000559380 164 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 AC004908.2-201ENST00000609090 574 ntBASIC1.28□□□□□ -2.2
TRAV3A0A0B4J244 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms