Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 SNORA63.1-201ENST00000362493 131 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 Y_RNA.259-201ENST00000364619 101 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 MIR218-2-201ENST00000385006 110 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 RNA5SP107-201ENST00000411358 122 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 RPL35AP22-201ENST00000436855 335 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AL118520.1-201ENST00000450770 291 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 SNRPFP3-201ENST00000457792 225 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AL162395.1-201ENST00000457882 422 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 RPL23AP55-201ENST00000498163 452 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 HMGB1P22-201ENST00000505315 124 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-1045P-201ENST00000516321 107 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-1073P-201ENST00000517182 106 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AC093249.1-201ENST00000567049 203 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AL669831.4-202ENST00000590817 238 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AL022099.1-201ENST00000604551 712 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AP001836.1-201ENST00000604675 523 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 uc_338.15-201ENST00000615470 191 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 uc_338.11-201ENST00000619132 160 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 XIST_intron.1-201ENST00000619444 68 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 AL365440.1-201ENST00000436135 2167 ntBASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.35□□□□□ -1.71
CTDP1Q9Y5B0 FAM35DP-201ENST00000323387 2712 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 RNA5SP387-201ENST00000364226 106 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-522P-201ENST00000364497 107 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-1013P-201ENST00000384180 107 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 Y_RNA.530-201ENST00000384587 101 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 SNORA11.1-201ENST00000408133 129 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 RNU2-47P-201ENST00000410649 186 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 MTCO2P27-201ENST00000420740 428 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 RNU7-180P-201ENST00000459240 63 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AC135721.1-201ENST00000497954 479 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-1170P-201ENST00000515974 106 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 HMGN1P28-201ENST00000521340 364 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 MIR4424-201ENST00000585257 86 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AC012603.1-201ENST00000606424 528 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 uc_338.34-201ENST00000617467 174 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 U6.98-201ENST00000637157 84 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 CEP170P1-201ENST00000502249 4587 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 MTCO1P9-201ENST00000505577 1534 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 PRO1804-201ENST00000623780 2050 ntBASIC4.34□□□□□ -1.71
CTDP1Q9Y5B0 AC004925.1-201ENST00000624256 2706 ntBASIC4.34□□□□□ -1.72
CTDP1Q9Y5B0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTDP1Q9Y5B0 IPO8P1-201ENST00000455509 3109 ntBASIC4.34□□□□□ -1.72
CTDP1Q9Y5B0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTDP1Q9Y5B0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 Y_RNA.132-201ENST00000363421 102 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 RNU5E-6P-201ENST00000365574 115 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 AC093578.1-201ENST00000415219 368 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 snoU13.24-201ENST00000458998 104 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 AC106707.2-201ENST00000484182 374 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 RPL31P61-201ENST00000496160 376 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 MTCO1P29-201ENST00000496868 288 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 RNU6-559P-201ENST00000516151 98 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 RNU6-1038P-201ENST00000516516 104 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 MTND4P7-201ENST00000523876 130 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 AC020661.2-201ENST00000560114 134 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 FRG2DP-202ENST00000566967 323 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms