Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
R3HCC1Q9Y3T6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
R3HCC1Q9Y3T6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 Y_RNA.460-201ENST00000384255 102 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 MIR493-201ENST00000385254 89 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 RPS26P8-201ENST00000393490 348 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 MIR548K-201ENST00000408406 116 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 MIR548F5-201ENST00000408421 86 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 COX6B1P7-201ENST00000430845 235 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 RPS3AP52-201ENST00000435639 297 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 FABP5P15-201ENST00000453566 214 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 KC877373.1-201ENST00000479066 408 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 AL160314.1-201ENST00000490836 438 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 AC022493.1-201ENST00000492984 337 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 AC104164.2-201ENST00000496953 495 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 RNU6-1315P-201ENST00000517187 99 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 MIR548AC-201ENST00000585049 88 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 MIR3138-201ENST00000585238 82 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 AC245389.1-201ENST00000605141 529 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 AC002044.1-201ENST00000606707 158 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 SNORD39.4-201ENST00000620099 78 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 AC008568.2-201ENST00000623862 2313 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 AP001486.2-201ENST00000561652 5113 ntBASIC4.58□□□□□ -1.68
R3HCC1Q9Y3T6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 Y_RNA.212-201ENST00000364177 102 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 SNORA75B-201ENST00000384053 137 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 RNA5SP239-201ENST00000410218 129 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 RNU2-33P-201ENST00000410344 192 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 RPL7P10-201ENST00000417407 739 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 PIGFP3-201ENST00000441918 722 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AC007677.1-201ENST00000445757 515 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 RN7SKP122-201ENST00000515923 296 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 RNU6-143P-201ENST00000516942 93 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 RNA5SP454-201ENST00000517231 127 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 MRPL49P2-201ENST00000521066 465 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 COPS8P3-201ENST00000526024 482 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AP003122.3-201ENST00000526316 255 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AP005639.2-201ENST00000527592 928 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AC084851.1-201ENST00000529105 249 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 ANP32BP3-201ENST00000559213 706 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 HSPE1P5-201ENST00000561489 272 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 MIR5692A1-201ENST00000580523 69 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AC023043.2-201ENST00000589678 1026 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AC016727.1-205ENST00000605437 569 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AL138726.1-201ENST00000614873 333 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AC007742.2-201ENST00000618226 398 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 AL359757.2-201ENST00000624309 274 ntBASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.57□□□□□ -1.68
R3HCC1Q9Y3T6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 Y_RNA.245-201ENST00000364493 95 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 SNORA70.2-201ENST00000364506 135 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 Y_RNA.387-201ENST00000383918 102 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 U3.42-201ENST00000408746 214 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 AC018644.1-201ENST00000429934 551 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 RPL32P28-201ENST00000443577 397 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 RANP8-201ENST00000444720 713 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 AC104472.2-201ENST00000469035 601 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 VN1R17P-201ENST00000472048 1090 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 RNA5SP290-201ENST00000517133 127 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 SNORA25.17-201ENST00000517184 124 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 TRAV8-5-201ENST00000537369 341 ntBASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.56□□□□□ -1.68
R3HCC1Q9Y3T6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms