Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HPS5Q9UPZ3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.97□□□□□ -1.45
HPS5Q9UPZ3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
HPS5Q9UPZ3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
HPS5Q9UPZ3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HPS5Q9UPZ3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.96□□□□□ -1.45
HPS5Q9UPZ3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HPS5Q9UPZ3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.45
HPS5Q9UPZ3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.96□□□□□ -1.45
HPS5Q9UPZ3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 Y_RNA.121-201ENST00000363309 113 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 Y_RNA.182-201ENST00000363880 111 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 SNORA2.3-201ENST00000383920 135 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 HMGB1P27-201ENST00000431429 603 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 POLR2KP2-201ENST00000438155 177 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 HMGB3P16-201ENST00000508037 287 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 RNU6-659P-201ENST00000516454 104 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 Y_RNA.709-201ENST00000516952 92 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 AC103996.1-201ENST00000555468 102 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 BPIFA4P-203ENST00000603168 689 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 AL591926.4-201ENST00000616895 298 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 AC139713.2-214ENST00000642059 1811 ntBASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
HPS5Q9UPZ3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 RNA5SP191-201ENST00000362585 102 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 RNU4-11P-201ENST00000365287 132 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 RNU6-211P-201ENST00000384047 107 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 MIR513C-201ENST00000401352 84 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 AL390729.2-201ENST00000416137 156 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 KNOP1P3-201ENST00000446933 426 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 AURKAPS2-201ENST00000454983 333 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 SNORA84-201ENST00000459229 133 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 RPL26P26-201ENST00000480251 434 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 SUMO2P6-201ENST00000505273 288 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 AP004242.1-201ENST00000533701 349 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 MIR4429-201ENST00000580105 73 ntBASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS5Q9UPZ3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 MIR298-201ENST00000401212 88 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 RNU2-22P-201ENST00000411266 212 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 RPL7AP73-201ENST00000413490 353 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 FTLP19-201ENST00000433300 394 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 RPS20P1-201ENST00000434853 354 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 RPS15AP7-201ENST00000439294 405 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 AL357134.1-201ENST00000445848 426 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 AC090602.1-201ENST00000469695 252 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 AC117440.1-201ENST00000474107 571 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 RN7SL244P-201ENST00000493405 297 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 AC115990.1-201ENST00000526957 301 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 TRAV37-201ENST00000553906 342 ntBASIC5.94□□□□□ -1.46
HPS5Q9UPZ3 OR4H12P-201ENST00000556269 907 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms