Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 SNORA51.1-201ENST00000363243 140 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 RNU1-132P-201ENST00000364300 164 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 RNU6-1303P-201ENST00000364841 107 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 Y_RNA.390-201ENST00000383932 102 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AL445189.1-201ENST00000405722 338 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AL162578.1-201ENST00000406202 378 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 RSU1P3-201ENST00000412878 835 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC138393.2-201ENST00000414742 246 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 USP9YP20-201ENST00000419224 558 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC245291.1-201ENST00000419501 328 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AL139095.3-201ENST00000419672 1203 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 HMGN2P10-201ENST00000448085 265 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC073850.1-201ENST00000449243 255 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 FAM206BP-201ENST00000510179 541 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 RN7SKP66-201ENST00000516681 231 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 RNU7-143P-201ENST00000516781 65 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC069113.1-201ENST00000517763 267 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC022634.1-201ENST00000520765 532 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC023050.3-201ENST00000541142 333 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 PSMA3P-201ENST00000555485 635 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 MIR4738-201ENST00000579134 87 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 MIR8058-201ENST00000615737 89 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 MIR6134-201ENST00000617606 109 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AP002799.1-201ENST00000623552 423 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC090617.10-201ENST00000624308 134 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 AC008669.1-201ENST00000565823 2178 ntBASIC3.1□□□□□ -1.91
CTDSP1Q9GZU7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 MFSD8-236ENST00000641509 4050 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 RNU6-266P-201ENST00000364225 107 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 Y_RNA.324-201ENST00000365165 102 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 MIR518D-201ENST00000385014 87 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 MIR10A-201ENST00000385043 110 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 RAP1BP3-201ENST00000407180 549 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 RNA5SP31-201ENST00000411144 127 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AL645937.1-202ENST00000421799 937 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 VN1R34P-201ENST00000447387 883 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 RPL35AP28-201ENST00000459730 331 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC010486.1-201ENST00000511793 424 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 RNU6-1069P-201ENST00000516612 133 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 SNORA20.3-201ENST00000516880 132 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 RNU6-1314P-201ENST00000517139 104 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 CDH12P4-201ENST00000517835 295 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 CDH12P3-201ENST00000517935 295 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 CDH12P1-201ENST00000518435 295 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC093331.1-201ENST00000521474 169 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC005344.1-201ENST00000613391 459 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC092628.2-201ENST00000622492 339 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC009033.1-201ENST00000624279 431 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC008013.2-202ENST00000637965 364 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 AC100810.6-201ENST00000638068 285 ntBASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.09□□□□□ -1.91
CTDSP1Q9GZU7 CDC27P3-201ENST00000635418 1910 ntBASIC3.09□□□□□ -1.92
CTDSP1Q9GZU7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTDSP1Q9GZU7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CTDSP1Q9GZU7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.08□□□□□ -1.92
CTDSP1Q9GZU7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTDSP1Q9GZU7 RNA5SP515-201ENST00000364570 118 ntBASIC3.08□□□□□ -1.92
CTDSP1Q9GZU7 Y_RNA.279-201ENST00000364763 95 ntBASIC3.08□□□□□ -1.92
CTDSP1Q9GZU7 RNU1-64P-201ENST00000365443 163 ntBASIC3.08□□□□□ -1.92
CTDSP1Q9GZU7 RNU6-171P-201ENST00000384354 107 ntBASIC3.08□□□□□ -1.92
CTDSP1Q9GZU7 RNU6-876P-201ENST00000391295 104 ntBASIC3.08□□□□□ -1.92
CTDSP1Q9GZU7 AC092642.1-201ENST00000392417 425 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms