Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 GPM6BP1-201ENST00000446387 144 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 COX6CP12-201ENST00000446748 202 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 RPL23AP35-201ENST00000451906 501 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AC233279.1-201ENST00000455300 423 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 RNA5SP148-201ENST00000516527 94 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 RNU1-104P-201ENST00000517280 175 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 BTF3P12-201ENST00000519620 469 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 OR4R1P-201ENST00000529879 463 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 OR5BN1P-201ENST00000532955 829 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AC060766.3-201ENST00000591442 263 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AF131215.7-201ENST00000602443 707 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AC021171.1-201ENST00000603137 706 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AC007621.1-201ENST00000604544 437 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 ADAM3A-203ENST00000461344 2157 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 MTND5P33-201ENST00000571250 1450 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AC092125.1-201ENST00000562568 1995 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AL359693.1-201ENST00000614959 2407 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 RPL21P132-201ENST00000331267 462 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 SNORD113-6-201ENST00000363345 75 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 MIR518C-201ENST00000384822 101 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 RNU6-278P-201ENST00000390945 109 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 HMGB1P27-201ENST00000431429 603 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 RPL36AP53-201ENST00000432891 316 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 HMGB1P41-201ENST00000520234 440 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 MRPS36P5-201ENST00000551909 298 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AC234778.2-201ENST00000566241 354 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 MIR3199-1-201ENST00000582434 88 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AC068790.3-201ENST00000602988 553 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AL355598.1-201ENST00000604169 202 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 BCRP9-201ENST00000605312 388 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AC072039.2-201ENST00000608883 439 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AL607023.1-201ENST00000620045 248 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 AC103706.2-201ENST00000638080 240 ntBASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.5□□□□□ -2.01
POLR1EQ9GZS1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 RNU6-778P-201ENST00000363269 103 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 SNORA41-201ENST00000384675 132 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AL359511.1-201ENST00000402970 211 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 SKA2P1-201ENST00000425592 390 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 FCF1P1-201ENST00000432690 571 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 MTATP6P30-201ENST00000443540 664 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AC133134.1-201ENST00000466800 359 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AL121769.1-201ENST00000469473 401 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AC126389.1-201ENST00000477436 290 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 GZMAP1-201ENST00000503054 631 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 TBCAP3-201ENST00000512475 312 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 MRPS36P3-201ENST00000519284 130 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AC135628.1-201ENST00000568867 534 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 MIR544B-201ENST00000582372 78 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AC098826.3-201ENST00000603823 466 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AL161798.1-201ENST00000604630 131 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AC012150.2-201ENST00000621300 544 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AC079416.3-201ENST00000624479 549 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.49□□□□□ -2.01
POLR1EQ9GZS1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms