Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC026801.1-201ENST00000497178 464 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 RNA5SP164-201ENST00000516533 110 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 RNU6-1213P-201ENST00000517075 94 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 SNORD116.3-201ENST00000517176 78 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 AC103783.1-201ENST00000520506 373 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 CYCSP27-201ENST00000527643 293 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 AC113195.1-201ENST00000579952 141 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 AC005899.2-201ENST00000584353 90 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 AC092608.2-201ENST00000624427 218 ntBASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNTNAP4Q9C0A0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AC005592.1-201ENST00000566527 1640 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 Y_RNA.152-201ENST00000363578 100 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 RNU6-393P-201ENST00000384475 107 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 SNORD70.1-201ENST00000391007 85 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 RNU2-64P-201ENST00000411315 191 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 RPS12P5-201ENST00000423449 371 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 RANP8-201ENST00000444720 713 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 HMGB3P17-201ENST00000504195 649 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AC110794.1-201ENST00000505816 425 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 RNU6-635P-201ENST00000516651 102 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 MIR5692C1-201ENST00000585309 91 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AC009229.3-201ENST00000608056 282 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 AC007998.5-201ENST00000622938 237 ntBASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNTNAP4Q9C0A0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 RNU6-99P-201ENST00000364721 107 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 Y_RNA.489-201ENST00000384410 101 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 Y_RNA.493-201ENST00000384422 102 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 NDUFB4P4-201ENST00000404822 243 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 RNU4-65P-201ENST00000410473 140 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 RNU6-293P-201ENST00000411259 106 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 RNU6-603P-201ENST00000411403 107 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 AL591704.1-201ENST00000432574 275 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 AC006517.1-201ENST00000480485 328 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 AC016065.2-201ENST00000514530 444 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 RNU6-27P-201ENST00000516146 107 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 AC107016.1-201ENST00000550463 337 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 AC011471.1-201ENST00000585766 187 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 AC243312.2-201ENST00000623340 601 ntBASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CNTNAP4Q9C0A0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 RNA5SP267-201ENST00000364893 126 ntBASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 Y_RNA.380-201ENST00000365663 111 ntBASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 RNU6-946P-201ENST00000383878 107 ntBASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 MTCO2P33-201ENST00000402100 465 ntBASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 RPL21P24-201ENST00000413752 448 ntBASIC4.87□□□□□ -1.63
CNTNAP4Q9C0A0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms