Protein–RNA interactions for Protein: Q9BZR9

TRIM8, Probable E3 ubiquitin-protein ligase TRIM8, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8Q9BZR9 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.23□□□□□ -1.73
TRIM8Q9BZR9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM8Q9BZR9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
TRIM8Q9BZR9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM8Q9BZR9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TRIM8Q9BZR9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TRIM8Q9BZR9 AC022336.2-201ENST00000568966 2538 ntBASIC4.23□□□□□ -1.73
TRIM8Q9BZR9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM8Q9BZR9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM8Q9BZR9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 RNU1-15P-201ENST00000353977 144 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 MIR448-201ENST00000362131 111 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 Y_RNA.149-201ENST00000363558 117 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 Y_RNA.476-201ENST00000384347 108 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 RNA5SP397-201ENST00000391323 118 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AL606923.1-201ENST00000406616 190 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 MIR548K-201ENST00000408406 116 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 RNU6-847P-201ENST00000411115 108 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 RPS20P14-201ENST00000412545 360 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AC093106.2-201ENST00000428212 385 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AL160004.2-201ENST00000432935 350 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 HMGB3P11-201ENST00000440127 604 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 U8.20-201ENST00000459445 131 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 SNRPGP3-201ENST00000469405 227 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 RNU6-864P-201ENST00000516256 108 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 Y_RNA.682-201ENST00000516457 100 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 RNU6-1256P-201ENST00000516539 103 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 Y_RNA.689-201ENST00000516589 107 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AP005435.4-201ENST00000529514 284 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AL161670.1-201ENST00000554348 137 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 HSPE1P5-201ENST00000561489 272 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 MIR3942-201ENST00000585264 109 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 AC008521.1-201ENST00000587471 187 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 BPIFA4P-203ENST00000603168 689 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 Z69720.2-201ENST00000624755 279 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 CPHL1P-201ENST00000461341 3407 ntBASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM8Q9BZR9 FAM35BP-202ENST00000497389 3337 ntBASIC4.21□□□□□ -1.73
TRIM8Q9BZR9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
TRIM8Q9BZR9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 AC118273.1-201ENST00000525324 3006 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 Y_RNA.158-201ENST00000363651 101 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 RNU6-38P-201ENST00000384085 107 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 MIR301A-201ENST00000385261 86 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 HSPE1P8-201ENST00000406997 288 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 RNU4-26P-201ENST00000410270 107 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 MIR1911-201ENST00000410783 80 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 RPL30P2-201ENST00000414021 291 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 RPL31P12-201ENST00000422587 358 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 AL162395.1-201ENST00000457882 422 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 RNU6-333P-201ENST00000459117 107 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 RPL31P60-201ENST00000478450 367 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 RPL30P5-201ENST00000494923 336 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 AC107222.1-201ENST00000510899 637 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 APOOP4-201ENST00000513530 597 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 RNU6-1088P-201ENST00000516850 104 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 MTND4P7-201ENST00000523876 130 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 AL137161.1-201ENST00000532231 390 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 AC022893.3-201ENST00000607665 437 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 AC034229.5-201ENST00000624258 185 ntBASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM8Q9BZR9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms