Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MIR4698-201ENST00000577795 80 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 AC012443.1-201ENST00000605605 231 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 AC073111.2-201ENST00000605657 1075 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
IFT140Q96RY7 UCA1.1-201ENST00000620952 75 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 AC010487.4-201ENST00000637027 61 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 RNU6-1249P-201ENST00000363237 111 ntBASIC1.52□□□□□ -2.17
IFT140Q96RY7 MIR936-201ENST00000401264 98 ntBASIC1.52□□□□□ -2.17
IFT140Q96RY7 PRRC2CP1-201ENST00000404428 159 ntBASIC1.52□□□□□ -2.17
IFT140Q96RY7 RPL21P90-201ENST00000415692 466 ntBASIC1.52□□□□□ -2.17
IFT140Q96RY7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.52□□□□□ -2.17
IFT140Q96RY7 HSPE1P24-201ENST00000450782 238 ntBASIC1.52□□□□□ -2.17
IFT140Q96RY7 RPS27P26-201ENST00000494583 239 ntBASIC1.52□□□□□ -2.17
IFT140Q96RY7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.52□□□□□ -2.17
IFT140Q96RY7 DEFB108E-201ENST00000524692 240 ntBASIC1.52□□□□□ -2.17
IFT140Q96RY7 AC079148.1-201ENST00000565944 819 ntBASIC1.52□□□□□ -2.17
IFT140Q96RY7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
IFT140Q96RY7 SNORD114-23-201ENST00000363536 72 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
IFT140Q96RY7 Y_RNA.433-201ENST00000384089 102 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 RNU6-17P-201ENST00000384245 107 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 RNU6-18P-201ENST00000384527 107 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 OFD1P18Y-201ENST00000420889 959 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.51□□□□□ -2.17
IFT140Q96RY7 AL359385.1-201ENST00000456509 365 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.51□□□□□ -2.17
IFT140Q96RY7 AC008494.2-201ENST00000514544 370 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 RNU6-970P-201ENST00000516312 107 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 RNA5SP121-201ENST00000516537 101 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 AC067904.2-201ENST00000517322 1283 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 AC008676.3-201ENST00000521237 435 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.51□□□□□ -2.17
IFT140Q96RY7 MIR4287-201ENST00000579398 78 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.51□□□□□ -2.17
IFT140Q96RY7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.51□□□□□ -2.17
IFT140Q96RY7 AC008669.1-201ENST00000565823 2178 ntBASIC1.51□□□□□ -2.17
IFT140Q96RY7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
IFT140Q96RY7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
IFT140Q96RY7 MIR330-201ENST00000362196 94 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 RNU5D-1-201ENST00000363299 116 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 MIR493-201ENST00000385254 89 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 OR6C66P-201ENST00000414917 930 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 AL121769.1-201ENST00000469473 401 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 PRELID3BP4-201ENST00000515476 571 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.5□□□□□ -2.17
IFT140Q96RY7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.5□□□□□ -2.17
IFT140Q96RY7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.5□□□□□ -2.17
IFT140Q96RY7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.5□□□□□ -2.17
IFT140Q96RY7 AL109933.3-201ENST00000619095 188 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 AC097372.4-201ENST00000625025 466 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 AL022578.1-201ENST00000439330 1433 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
IFT140Q96RY7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
IFT140Q96RY7 RNU6-31P-201ENST00000384388 108 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
IFT140Q96RY7 AL356432.1-201ENST00000405809 419 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.5□□□□□ -2.17
IFT140Q96RY7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.5□□□□□ -2.17
IFT140Q96RY7 AC004022.1-201ENST00000447766 1066 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.5□□□□□ -2.17
IFT140Q96RY7 AC111193.1-201ENST00000504097 155 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 CBX3P3-201ENST00000508108 532 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.5□□□□□ -2.17
IFT140Q96RY7 RNA5SP476-201ENST00000516613 103 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 RNU6-928P-201ENST00000516876 104 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 SNORA31.18-201ENST00000517043 134 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 AC103833.1-201ENST00000517442 172 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.5□□□□□ -2.17
IFT140Q96RY7 AC005498.1-201ENST00000592125 465 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 AL109918.3-201ENST00000603072 338 ntBASIC1.5□□□□□ -2.17
IFT140Q96RY7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.5□□□□□ -2.17
IFT140Q96RY7 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 SNORA70.7-201ENST00000384159 133 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 RNU4-31P-201ENST00000384211 141 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 RNU1-78P-201ENST00000391248 165 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.49□□□□□ -2.17
IFT140Q96RY7 AL513475.1-201ENST00000406602 315 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.49□□□□□ -2.17
IFT140Q96RY7 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.49□□□□□ -2.17
IFT140Q96RY7 AC096751.1-202ENST00000502691 1067 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 AC092451.2-201ENST00000538746 658 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 AL049870.4-201ENST00000555741 486 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 MIR3609-201ENST00000582661 80 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 AC025588.4-201ENST00000615802 908 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 MIR924-201ENST00000638017 53 ntBASIC1.49□□□□□ -2.17
IFT140Q96RY7 AC123912.3-201ENST00000600907 1367 ntBASIC1.48□□□□□ -2.17
IFT140Q96RY7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.48□□□□□ -2.17
IFT140Q96RY7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
IFT140Q96RY7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
IFT140Q96RY7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.48□□□□□ -2.17
IFT140Q96RY7 AC079780.1-201ENST00000428259 207 ntBASIC1.48□□□□□ -2.17
IFT140Q96RY7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
IFT140Q96RY7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.48□□□□□ -2.17
IFT140Q96RY7 AC118469.1-201ENST00000442943 488 ntBASIC1.48□□□□□ -2.17
IFT140Q96RY7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.48□□□□□ -2.17
IFT140Q96RY7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.48□□□□□ -2.17
IFT140Q96RY7 AC005908.1-201ENST00000468701 347 ntBASIC1.48□□□□□ -2.17
IFT140Q96RY7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.48□□□□□ -2.17
IFT140Q96RY7 AC087465.1-201ENST00000560574 245 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms