Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC092106.3-201ENST00000611308 722 ntBASIC2.81□□□□□ -1.96
CCDC7Q96M83 Y_RNA.783-201ENST00000613546 102 ntBASIC2.81□□□□□ -1.96
CCDC7Q96M83 AC090132.2-201ENST00000615881 347 ntBASIC2.81□□□□□ -1.96
CCDC7Q96M83 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC7Q96M83 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
CCDC7Q96M83 TPTE2P4-201ENST00000258589 1605 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 Y_RNA.338-201ENST00000365320 114 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 CD24P4-201ENST00000382840 243 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 RNU6-157P-201ENST00000383957 107 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 RNU6-516P-201ENST00000411381 104 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 TPMTP3-201ENST00000411928 735 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC7Q96M83 NDUFB4P7-201ENST00000423198 363 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 AC234781.2-201ENST00000426370 994 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 ISCA1P6-201ENST00000427740 390 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 AL590383.1-201ENST00000428602 75 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 RPL7P54-201ENST00000438336 674 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC7Q96M83 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CCDC7Q96M83 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC7Q96M83 RNU6-840P-201ENST00000517275 65 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 MTND2P32-201ENST00000521584 1038 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC7Q96M83 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC7Q96M83 DUXAP1-201ENST00000556632 463 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC7Q96M83 AC087465.1-201ENST00000560574 245 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC7Q96M83 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC7Q96M83 AL357094.1-201ENST00000603845 844 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 AC009314.1-201ENST00000603871 304 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 AC009268.2-201ENST00000621925 457 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 AC068787.1-201ENST00000623908 691 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 MIR4275-201ENST00000636486 87 ntBASIC2.8□□□□□ -1.96
CCDC7Q96M83 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC7Q96M83 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC7Q96M83 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC7Q96M83 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC7Q96M83 RN7SKP226-201ENST00000364912 300 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 SNORA72.3-201ENST00000365074 132 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 RNA5SP37-201ENST00000365420 130 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CCDC7Q96M83 MTCO1P17-201ENST00000411522 491 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 PIGPP2-201ENST00000411569 458 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 HMGB1P49-201ENST00000418882 569 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 MTCO2P21-201ENST00000419780 677 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 TAAR7P-201ENST00000436141 242 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 AL606517.1-201ENST00000446914 387 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC7Q96M83 AC109486.1-201ENST00000486833 374 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 AC020699.1-201ENST00000505161 445 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 RNU6-1256P-201ENST00000516539 103 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 RNU6-56P-201ENST00000516986 93 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC7Q96M83 AC105185.1-201ENST00000518705 535 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 HMGN1P28-201ENST00000521340 364 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC7Q96M83 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC7Q96M83 GLUD1P4-201ENST00000590914 418 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC7Q96M83 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC7Q96M83 SNRPGP19-201ENST00000603826 189 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 AC013553.2-201ENST00000604244 589 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 AL049779.4-201ENST00000604500 156 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 AP002782.1-201ENST00000623107 614 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 AC019226.1-201ENST00000625666 515 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC7Q96M83 AC087359.1-201ENST00000508335 1740 ntBASIC2.79□□□□□ -1.96
CCDC7Q96M83 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC7Q96M83 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC7Q96M83 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC7Q96M83 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC7Q96M83 DDX10P1-201ENST00000448545 1933 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 RNU1-17P-201ENST00000363022 152 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 MIR325-201ENST00000385260 98 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 U3.20-201ENST00000390909 217 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC7Q96M83 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.78□□□□□ -1.96
CCDC7Q96M83 MTND1P23-201ENST00000416931 372 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 CYCSP49-201ENST00000420810 319 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 AC027124.2-201ENST00000428249 105 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC7Q96M83 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC7Q96M83 AP000542.1-201ENST00000448473 371 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 AC010099.1-201ENST00000455434 375 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC7Q96M83 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC7Q96M83 AC093809.1-201ENST00000509155 340 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 RNU6-415P-201ENST00000516252 97 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 RNU5A-4P-201ENST00000516588 111 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC7Q96M83 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC7Q96M83 AGGF1P5-201ENST00000567900 919 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 AL050303.3-201ENST00000613704 284 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC7Q96M83 AC091046.2-201ENST00000620775 665 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC7Q96M83 AP003122.6-201ENST00000623831 495 ntBASIC2.78□□□□□ -1.96
CCDC7Q96M83 AL356596.1-201ENST00000624230 379 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms