Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RN7SKP96-201ENST00000516948 297 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AC022893.2-201ENST00000564832 3296 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AC127455.1-201ENST00000565496 145 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 OR1M4P-201ENST00000589199 287 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 AC010300.1-201ENST00000600671 5134 ntBASIC5.61□□□□□ -1.51
TRIM47Q96LD4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM47Q96LD4 THAP12P5-201ENST00000405864 2275 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 AC009951.1-201ENST00000623674 2614 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 U8.7-201ENST00000364940 136 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 CTSL3P-202ENST00000412179 788 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 AC109327.1-201ENST00000471666 403 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 RPL31P60-201ENST00000478450 367 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 AC093767.1-201ENST00000504523 156 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 FTH1P11-201ENST00000517577 551 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 TRAV32-201ENST00000553993 340 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 AC090617.3-201ENST00000573670 475 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 MIR5696-201ENST00000578474 85 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 MIR5582-201ENST00000579697 68 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 MIR3939-201ENST00000582614 106 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 FAM27B-201ENST00000610601 213 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 uc_338.9-201ENST00000617424 182 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 AC073349.3-201ENST00000617616 186 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 AC008785.1-201ENST00000624475 456 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 MTND5P9-201ENST00000503854 1755 ntBASIC5.6□□□□□ -1.51
TRIM47Q96LD4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM47Q96LD4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 AC083843.3-201ENST00000623679 2186 ntBASIC5.59□□□□□ -1.51
TRIM47Q96LD4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 RNU6-1284P-201ENST00000363701 100 ntBASIC5.59□□□□□ -1.51
TRIM47Q96LD4 RNU4-84P-201ENST00000364200 139 ntBASIC5.59□□□□□ -1.51
TRIM47Q96LD4 RNU6-755P-201ENST00000364400 103 ntBASIC5.59□□□□□ -1.51
TRIM47Q96LD4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 AL512844.2-201ENST00000433990 593 ntBASIC5.59□□□□□ -1.51
TRIM47Q96LD4 RPS4XP22-201ENST00000480755 780 ntBASIC5.59□□□□□ -1.51
TRIM47Q96LD4 RN7SL441P-201ENST00000492388 296 ntBASIC5.59□□□□□ -1.51
TRIM47Q96LD4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 AC025755.1-201ENST00000521306 278 ntBASIC5.59□□□□□ -1.51
TRIM47Q96LD4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 MIR92B-201ENST00000607575 96 ntBASIC5.59□□□□□ -1.51
TRIM47Q96LD4 AC011476.5-201ENST00000615594 130 ntBASIC5.59□□□□□ -1.51
TRIM47Q96LD4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 AP000542.2-201ENST00000623199 6179 ntBASIC5.59□□□□□ -1.51
TRIM47Q96LD4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM47Q96LD4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
TRIM47Q96LD4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM47Q96LD4 AP000756.2-201ENST00000624168 2567 ntBASIC5.59□□□□□ -1.52
TRIM47Q96LD4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM47Q96LD4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM47Q96LD4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM47Q96LD4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM47Q96LD4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM47Q96LD4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM47Q96LD4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM47Q96LD4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM47Q96LD4 Y_RNA.286-201ENST00000364813 102 ntBASIC5.58□□□□□ -1.52
TRIM47Q96LD4 RNU1-64P-201ENST00000365443 163 ntBASIC5.58□□□□□ -1.52
TRIM47Q96LD4 MIR539-201ENST00000365690 78 ntBASIC5.58□□□□□ -1.52
TRIM47Q96LD4 RNU6-147P-201ENST00000383983 107 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms