Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 DEFB109B-201ENST00000382656 264 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AC114491.1-201ENST00000416095 246 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 AC017079.2-201ENST00000416102 485 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AC003071.1-201ENST00000451219 789 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 U3.44-201ENST00000458938 192 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 RPL21P104-201ENST00000464143 478 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 AC006512.1-201ENST00000468816 291 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 Y_RNA.693-201ENST00000516641 110 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 Y_RNA.704-201ENST00000516851 102 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 NRON-201ENST00000517270 370 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AP006587.4-201ENST00000526053 529 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 OR5AQ1P-201ENST00000527596 927 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AK6P1-201ENST00000540219 478 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX27Q96L92 AC007363.1-201ENST00000604736 620 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 AC068944.2-201ENST00000610373 403 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 MIR7112-201ENST00000616126 65 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 AC005609.4-201ENST00000625071 447 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX27Q96L92 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.82□□□□□ -1.8
SNX27Q96L92 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SNX27Q96L92 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX27Q96L92 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX27Q96L92 FRG1CP-201ENST00000358464 769 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RNU4-35P-201ENST00000362588 141 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RNU6-283P-201ENST00000364788 107 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 Y_RNA.450-201ENST00000384198 113 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 Y_RNA.481-201ENST00000384373 102 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 HSPE1P26-201ENST00000405341 275 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RNU2-37P-201ENST00000410695 177 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX27Q96L92 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX27Q96L92 AL451054.2-201ENST00000420896 202 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX27Q96L92 MTCYBP5-201ENST00000423752 1135 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RPL27AP8-201ENST00000424277 446 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX27Q96L92 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX27Q96L92 AC005019.1-201ENST00000436455 431 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RPL7P54-201ENST00000438336 674 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RN7SL594P-201ENST00000470590 287 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RPL31P60-201ENST00000478450 367 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RPS4XP13-201ENST00000483219 789 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RNU2-27P-201ENST00000516185 142 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RNA5SP341-201ENST00000516261 117 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 RNU6-548P-201ENST00000517083 115 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.81□□□□□ -1.8
SNX27Q96L92 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX27Q96L92 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.81□□□□□ -1.8
SNX27Q96L92 RPS3AP4-201ENST00000555161 764 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 AC025678.1-201ENST00000567861 338 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.81□□□□□ -1.8
SNX27Q96L92 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX27Q96L92 AP001330.5-201ENST00000607176 411 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 AC093648.1-201ENST00000623546 606 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 AC048347.1-201ENST00000624621 427 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX27Q96L92 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX27Q96L92 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SNX27Q96L92 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX27Q96L92 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX27Q96L92 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX27Q96L92 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX27Q96L92 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX27Q96L92 AP001148.1-201ENST00000624124 2359 ntBASIC3.81□□□□□ -1.8
SNX27Q96L92 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX27Q96L92 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 MFSD8-233ENST00000641482 4860 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX27Q96L92 RNU4-82P-201ENST00000362443 140 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 RNU6-946P-201ENST00000383878 107 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 SNORD17-201ENST00000390930 237 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 RNU6-482P-201ENST00000391068 107 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 CIR1P3-201ENST00000405137 479 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 MIR1290-201ENST00000408735 78 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX27Q96L92 AC007390.1-201ENST00000415722 356 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 MRPL50P2-201ENST00000416821 482 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX27Q96L92 ELOCP14-201ENST00000428070 331 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 ELOCP7-201ENST00000439968 331 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 NEFMP1-201ENST00000443423 1006 ntBASIC3.8□□□□□ -1.8
SNX27Q96L92 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms