Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 CPHL1P-201ENST00000461341 3407 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 Z75746.1-201ENST00000440243 2080 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 MIR195-201ENST00000385194 87 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 AL590704.1-201ENST00000402856 794 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 RN7SKP167-201ENST00000411047 285 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 RNU6-325P-201ENST00000411132 105 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 AC007098.1-201ENST00000420122 367 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 CEACAMP1-201ENST00000434624 1035 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 NDUFB4P10-201ENST00000452541 359 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 RFPL4AP5-201ENST00000514977 504 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 SULT1C2P2-201ENST00000562517 294 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 AC136932.1-201ENST00000574771 208 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 CPDP1-201ENST00000579660 283 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 RN7SL176P-201ENST00000580352 264 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 AC067852.3-201ENST00000589177 561 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 AL020997.2-201ENST00000602607 184 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 AC007619.2-201ENST00000605743 379 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 MIR376A1-201ENST00000616574 68 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 MIR6864-201ENST00000617935 70 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 FP236240.3-201ENST00000623061 327 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 AC005183.1-201ENST00000603687 1979 ntBASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHKBP1Q8TBC3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 Y_RNA.27-201ENST00000362540 103 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 SNORA70C-201ENST00000384538 135 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 AL080315.1-201ENST00000406055 466 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 RNU2-20P-201ENST00000410425 191 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 RNU2-22P-201ENST00000411266 212 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 BX842559.1-201ENST00000419615 532 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 RPL17P36-201ENST00000420302 549 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 RPS27AP12-201ENST00000429552 465 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 AL513124.1-201ENST00000450410 614 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 RPL21P41-201ENST00000459863 264 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 RPL7AP28-201ENST00000464513 571 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 HMGN2P13-201ENST00000476476 274 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 RPL30P11-201ENST00000495304 339 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 AC016065.2-201ENST00000514530 444 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 RNU7-200P-201ENST00000516105 62 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 AF186190.1-201ENST00000517470 480 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 MRPS36P4-201ENST00000534436 298 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 AC007224.1-201ENST00000564410 144 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 AC008962.1-201ENST00000605729 304 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 MIR3976-201ENST00000606807 139 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 DHX9P1-201ENST00000436565 3076 ntBASIC4.69□□□□□ -1.66
SHKBP1Q8TBC3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 RNA5SP28-201ENST00000363841 119 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 RPS29P13-201ENST00000402041 169 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AL591034.2-201ENST00000402839 359 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 RPL23AP26-201ENST00000412728 464 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 RPL37P6-201ENST00000460682 294 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 RN7SL817P-201ENST00000480777 288 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC087190.1-201ENST00000484462 480 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC107032.1-201ENST00000485945 480 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC091167.1-201ENST00000492017 396 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC074250.1-201ENST00000511117 192 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC026402.1-201ENST00000513642 170 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 RNU6-677P-201ENST00000516914 101 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 RN7SKP60-201ENST00000516985 239 ntBASIC4.68□□□□□ -1.66
SHKBP1Q8TBC3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms