Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 RNU6-270P-201ENST00000364131 105 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 RNA5SP479-201ENST00000364858 117 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 MIR1302-4-201ENST00000408701 150 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 RNU2-21P-201ENST00000410368 188 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 RNA5SP113-201ENST00000410486 84 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 RPL31P2-201ENST00000413849 377 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 AL390729.2-201ENST00000416137 156 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 COX6CP13-201ENST00000428703 226 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 AL354714.3-201ENST00000447284 493 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 AC034236.1-201ENST00000469891 373 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 AC115990.1-201ENST00000526957 301 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 AC055872.1-201ENST00000570978 278 ntBASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-3Q8TAU0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 IQCB2P-201ENST00000401788 1633 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 BTBD10P1-201ENST00000549824 1352 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 Y_RNA.217-201ENST00000364214 105 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 Y_RNA.238-201ENST00000364441 102 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 Y_RNA.412-201ENST00000384001 104 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 Y_RNA.446-201ENST00000384178 104 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 RNU6-429P-201ENST00000384582 108 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 SNORA48.7-201ENST00000391302 135 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 RNU6-1064P-201ENST00000410626 104 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 AC073587.1-201ENST00000447093 876 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 Y_RNA.641-201ENST00000459414 105 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 AC073901.1-201ENST00000462471 408 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 RNU6-914P-201ENST00000516749 109 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 RNU7-110P-201ENST00000516891 62 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 RN7SKP258-201ENST00000517151 304 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 RPL21P9-201ENST00000556149 474 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 AC025588.3-201ENST00000604182 274 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 MIR6130-201ENST00000619419 109 ntBASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.85□□□□□ -1.47
NKX2-3Q8TAU0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 RNU6-989P-201ENST00000362756 107 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 RNU4-56P-201ENST00000364700 142 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 TBCAP2-201ENST00000416175 326 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 AC024067.1-201ENST00000426199 223 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 AC004975.1-201ENST00000428733 208 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 RPL23AP58-201ENST00000440453 469 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 AL357134.1-201ENST00000445848 426 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 HIGD1AP2-201ENST00000446367 280 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 snoU109.4-201ENST00000458953 143 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 PPIAP21-201ENST00000464473 501 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 AC090281.1-201ENST00000523019 276 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 AC005868.1-201ENST00000536421 331 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 AC008749.1-201ENST00000597650 306 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 AL034351.1-201ENST00000605288 668 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 AC068724.3-201ENST00000625906 87 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms