Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC104581.2-201ENST00000572227 430 ntBASIC1.9□□□□□ -2.11
CCDC112Q8NEF3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC112Q8NEF3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC112Q8NEF3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC112Q8NEF3 AC007229.1-201ENST00000590455 412 ntBASIC1.9□□□□□ -2.11
CCDC112Q8NEF3 DUXAP10-204ENST00000612052 616 ntBASIC1.9□□□□□ -2.11
CCDC112Q8NEF3 MIR6845-201ENST00000613182 61 ntBASIC1.9□□□□□ -2.11
CCDC112Q8NEF3 AC025048.6-202ENST00000627667 438 ntBASIC1.9□□□□□ -2.11
CCDC112Q8NEF3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC112Q8NEF3 AL589826.1-201ENST00000340697 249 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 RNU6-1300P-201ENST00000391046 108 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 RPL22P22-201ENST00000395439 379 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 RPL7P27-201ENST00000403775 720 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 SNORD56-201ENST00000413522 71 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 AC019178.2-201ENST00000423595 505 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 MTCYBP15-201ENST00000433123 1127 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 Z82210.1-201ENST00000440037 231 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 PIGFP3-201ENST00000441918 722 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 FABP5P13-201ENST00000452144 328 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 MTND4P2-201ENST00000507767 1203 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 CBX3P7-201ENST00000532876 502 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 AC004853.1-201ENST00000604902 698 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 AL589743.7-201ENST00000612637 233 ntBASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC112Q8NEF3 AP005901.5-201ENST00000545779 1796 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 RNU6-354P-201ENST00000383862 107 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 RNU6-1083P-201ENST00000384022 107 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 RNU6-610P-201ENST00000384264 107 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 MIR506-201ENST00000384998 124 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 HMGB1P49-201ENST00000418882 569 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 FO393414.1-201ENST00000428697 1184 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC104564.1-201ENST00000493028 407 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 MRPS17P9-201ENST00000511924 393 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AP005435.4-201ENST00000529514 284 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC125611.1-201ENST00000549563 229 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC044913.1-201ENST00000557200 430 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC090330.1-201ENST00000588646 764 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC025165.5-201ENST00000602802 578 ntBASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC112Q8NEF3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 PPP1R11P2-201ENST00000423543 382 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 MICF-203ENST00000432679 129 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 AL603825.1-201ENST00000438481 80 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 AC092393.1-201ENST00000439625 742 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 AC026410.2-201ENST00000460281 156 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 SCARNA3-201ENST00000517097 143 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 AL132857.1-201ENST00000555180 708 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 CYCSP2-201ENST00000558168 301 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 MIR4287-201ENST00000579398 78 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 AC022662.1-201ENST00000580252 331 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC112Q8NEF3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 Y_RNA.548-201ENST00000384656 105 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 SNORA40.18-201ENST00000391200 128 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 MIR1294-201ENST00000408503 142 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 XKRYP1-201ENST00000423438 492 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 FAM204CP-201ENST00000424489 642 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 XKRYP2-201ENST00000432915 492 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 MTCYBP11-201ENST00000447254 1109 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 RPL39P6-201ENST00000448289 150 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 RPS15AP17-201ENST00000470598 390 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms