Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 ATG3P1-201ENST00000419507 911 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 AC018865.2-201ENST00000423631 129 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 HMGB3P21-201ENST00000452483 547 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 RPL12P25-201ENST00000455592 494 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 RPL21P10-201ENST00000463521 490 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 AC084198.1-201ENST00000477747 402 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 AC103783.1-201ENST00000520506 373 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 GNRHR2P1-201ENST00000555315 631 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 BNIP3P16-201ENST00000589779 534 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 AC010680.4-201ENST00000605334 543 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 AC009570.1-201ENST00000609599 745 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 FAM157A-202ENST00000615155 405 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 MIR8057-201ENST00000620957 69 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 AC110801.1-201ENST00000623590 212 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 AC027287.1-201ENST00000553115 1453 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.71□□□□□ -1.65
LINC00116Q8NCU8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.71□□□□□ -1.65
LINC00116Q8NCU8 PNPT1P2-201ENST00000456768 2050 ntBASIC4.71□□□□□ -1.65
LINC00116Q8NCU8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 AC007685.1-201ENST00000329806 452 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 RNU6-989P-201ENST00000362756 107 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 RNU6-249P-201ENST00000363016 102 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 Y_RNA.149-201ENST00000363558 117 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 Y_RNA.193-201ENST00000363979 102 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 Y_RNA.364-201ENST00000365532 101 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 RNU6-701P-201ENST00000384059 107 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 RNU6-393P-201ENST00000384475 107 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 Y_RNA.527-201ENST00000384573 102 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 RNU6-146P-201ENST00000384602 108 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 Y_RNA.557-201ENST00000384680 107 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 MIR1302-3-201ENST00000408128 138 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 AC092447.6-201ENST00000414578 210 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 AC090115.3-201ENST00000553218 849 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 MIR5692C1-201ENST00000585309 91 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 AC073539.2-201ENST00000597113 165 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 AC011890.2-201ENST00000613393 294 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 U4.1-201ENST00000620349 87 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 DDX10P1-201ENST00000448545 1933 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 MTND5P30-201ENST00000452896 1731 ntBASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LINC00116Q8NCU8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 SNORD3E-201ENST00000362899 217 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC019155.1-201ENST00000382242 574 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 SNORA16.2-201ENST00000390991 127 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 RNU6-821P-201ENST00000390995 107 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 GNG5P5-201ENST00000420444 220 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC008065.1-201ENST00000428525 348 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 PSMA2P3-201ENST00000429685 675 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 HLA-N-201ENST00000437516 135 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AL162389.1-201ENST00000449233 177 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 HMGB1P25-201ENST00000468402 607 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 RN7SL807P-201ENST00000470923 297 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC010631.1-201ENST00000474150 156 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AP001086.1-201ENST00000494882 321 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 RPL31P61-201ENST00000496160 376 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC017037.1-201ENST00000508460 471 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC116337.1-201ENST00000509680 687 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 SNORA14.1-201ENST00000516113 141 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 RNU2-27P-201ENST00000516185 142 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC008011.1-201ENST00000545989 227 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms