Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 AL161651.1-201ENST00000440882 223 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 AC004924.1-201ENST00000480160 781 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 RPL39P36-201ENST00000490784 156 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 RPL22P13-201ENST00000493291 347 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NME8Q8N427 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.3□□□□□ -1.88
NME8Q8N427 RNA5SP367-201ENST00000516557 118 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 SCARNA3-201ENST00000517097 143 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.3□□□□□ -1.88
NME8Q8N427 AC011979.2-201ENST00000527568 352 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NME8Q8N427 MIR4307-201ENST00000582802 84 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 AC104763.2-201ENST00000604179 382 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.3□□□□□ -1.88
NME8Q8N427 AC080128.1-201ENST00000474389 1917 ntBASIC3.3□□□□□ -1.88
NME8Q8N427 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NME8Q8N427 NACAP2-201ENST00000318548 624 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.29□□□□□ -1.88
NME8Q8N427 MTCO3P30-201ENST00000426425 670 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 OR2AS1P-201ENST00000427827 319 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.29□□□□□ -1.88
NME8Q8N427 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NME8Q8N427 RPL22P17-201ENST00000438729 315 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.29□□□□□ -1.88
NME8Q8N427 RNU7-26P-201ENST00000458980 63 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 AC068587.2-201ENST00000478386 781 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NME8Q8N427 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.29□□□□□ -1.88
NME8Q8N427 SCGB1D5P-201ENST00000515134 247 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 RNU1-143P-201ENST00000516296 146 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 RNU6-678P-201ENST00000516832 109 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 RNU6-703P-201ENST00000516946 107 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.29□□□□□ -1.88
NME8Q8N427 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.29□□□□□ -1.88
NME8Q8N427 MIR4765-201ENST00000585007 77 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.29□□□□□ -1.88
NME8Q8N427 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.29□□□□□ -1.88
NME8Q8N427 AL355472.4-201ENST00000610233 626 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 U1.23-201ENST00000610293 146 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 RNU1-68P-201ENST00000615382 146 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 U1.39-201ENST00000621562 146 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 MTND5P19-201ENST00000424872 1794 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 MAPK10-266ENST00000641066 6555 ntBASIC3.29□□□□□ -1.88
NME8Q8N427 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NME8Q8N427 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.28□□□□□ -1.88
NME8Q8N427 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NME8Q8N427 AL365361.1-201ENST00000566942 3481 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NME8Q8N427 AC073325.2-201ENST00000339545 159 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 RNU4-28P-201ENST00000364739 141 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 RSL24D1P4-201ENST00000400938 484 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 MTATP6P17-201ENST00000431030 672 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.28□□□□□ -1.88
NME8Q8N427 RPS29P26-201ENST00000477483 171 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.28□□□□□ -1.88
NME8Q8N427 RNA5SP112-201ENST00000515937 99 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 RNU6-1003P-201ENST00000517099 105 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.28□□□□□ -1.88
NME8Q8N427 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.28□□□□□ -1.88
NME8Q8N427 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.28□□□□□ -1.88
NME8Q8N427 AL589743.7-201ENST00000612637 233 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 AC010678.1-201ENST00000614118 713 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 AL031667.3-201ENST00000620124 655 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.28□□□□□ -1.88
NME8Q8N427 MIR203B-201ENST00000636080 86 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 FO624990.1-201ENST00000636373 85 ntBASIC3.28□□□□□ -1.88
NME8Q8N427 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.28□□□□□ -1.88
NME8Q8N427 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.28□□□□□ -1.88
NME8Q8N427 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NME8Q8N427 MTND4P35-201ENST00000604257 1375 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NME8Q8N427 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NME8Q8N427 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NME8Q8N427 RNU6-486P-201ENST00000363116 107 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NME8Q8N427 RPS27AP14-201ENST00000422868 454 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 PTGES3P4-201ENST00000426243 356 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 RPL37P21-201ENST00000435890 276 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 AL135938.1-201ENST00000443141 297 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 AC009961.3-201ENST00000449832 765 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.27□□□□□ -1.89
NME8Q8N427 AC080013.2-201ENST00000460866 323 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.27□□□□□ -1.89
NME8Q8N427 UBE2DNL-203ENST00000474922 222 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 AC072039.1-201ENST00000477611 581 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NME8Q8N427 RNU2-10P-201ENST00000516375 211 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 RNU6-201P-201ENST00000517100 61 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.27□□□□□ -1.89
NME8Q8N427 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.27□□□□□ -1.89
NME8Q8N427 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.27□□□□□ -1.89
NME8Q8N427 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.27□□□□□ -1.89
NME8Q8N427 AC006199.1-201ENST00000548728 219 ntBASIC3.27□□□□□ -1.89
NME8Q8N427 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.27□□□□□ -1.89
NME8Q8N427 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NME8Q8N427 MIR3146-201ENST00000580367 79 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms