Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC055855.1-201ENST00000489563 579 ntBASIC1.42□□□□□ -2.18
VPS8Q8N3P4 AC092436.3-201ENST00000511788 257 ntBASIC1.42□□□□□ -2.18
VPS8Q8N3P4 LINC00933-203ENST00000559812 219 ntBASIC1.42□□□□□ -2.18
VPS8Q8N3P4 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS8Q8N3P4 AC108706.1-201ENST00000611053 297 ntBASIC1.42□□□□□ -2.18
VPS8Q8N3P4 AC091304.6-201ENST00000619761 202 ntBASIC1.42□□□□□ -2.18
VPS8Q8N3P4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS8Q8N3P4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.42□□□□□ -2.18
VPS8Q8N3P4 SNORA23-201ENST00000365128 182 ntBASIC1.41□□□□□ -2.18
VPS8Q8N3P4 MIR613-201ENST00000385248 95 ntBASIC1.41□□□□□ -2.18
VPS8Q8N3P4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS8Q8N3P4 HSPE1P21-201ENST00000438283 308 ntBASIC1.41□□□□□ -2.18
VPS8Q8N3P4 FGF7P5-201ENST00000441829 291 ntBASIC1.41□□□□□ -2.18
VPS8Q8N3P4 AC017099.1-201ENST00000448261 1028 ntBASIC1.41□□□□□ -2.18
VPS8Q8N3P4 AC087884.1-201ENST00000469738 328 ntBASIC1.41□□□□□ -2.18
VPS8Q8N3P4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS8Q8N3P4 RNF138P1-201ENST00000502765 546 ntBASIC1.41□□□□□ -2.18
VPS8Q8N3P4 AC019176.1-201ENST00000518519 225 ntBASIC1.41□□□□□ -2.18
VPS8Q8N3P4 AC004923.2-201ENST00000529649 369 ntBASIC1.41□□□□□ -2.18
VPS8Q8N3P4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS8Q8N3P4 MED28P6-201ENST00000558776 231 ntBASIC1.41□□□□□ -2.18
VPS8Q8N3P4 AC011260.1-201ENST00000578420 472 ntBASIC1.41□□□□□ -2.18
VPS8Q8N3P4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS8Q8N3P4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
VPS8Q8N3P4 AC092573.2-201ENST00000434546 243 ntBASIC1.4□□□□□ -2.18
VPS8Q8N3P4 AL022238.1-201ENST00000442557 355 ntBASIC1.4□□□□□ -2.18
VPS8Q8N3P4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.4□□□□□ -2.18
VPS8Q8N3P4 RPS23P4-201ENST00000487908 423 ntBASIC1.4□□□□□ -2.18
VPS8Q8N3P4 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.4□□□□□ -2.18
VPS8Q8N3P4 HMGB1P14-201ENST00000557424 591 ntBASIC1.4□□□□□ -2.18
VPS8Q8N3P4 AC211469.2-201ENST00000605461 205 ntBASIC1.4□□□□□ -2.18
VPS8Q8N3P4 MIR6734-201ENST00000621166 68 ntBASIC1.4□□□□□ -2.18
VPS8Q8N3P4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.4□□□□□ -2.19
VPS8Q8N3P4 AC234781.2-201ENST00000426370 994 ntBASIC1.4□□□□□ -2.19
VPS8Q8N3P4 AC008850.1-201ENST00000427546 362 ntBASIC1.4□□□□□ -2.19
VPS8Q8N3P4 AC118469.1-201ENST00000442943 488 ntBASIC1.4□□□□□ -2.19
VPS8Q8N3P4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS8Q8N3P4 snoU109.1-201ENST00000459339 135 ntBASIC1.4□□□□□ -2.19
VPS8Q8N3P4 RNU7-23P-201ENST00000459465 62 ntBASIC1.4□□□□□ -2.19
VPS8Q8N3P4 AC104689.1-201ENST00000473356 768 ntBASIC1.4□□□□□ -2.19
VPS8Q8N3P4 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.4□□□□□ -2.19
VPS8Q8N3P4 SNORA31.13-201ENST00000516624 135 ntBASIC1.4□□□□□ -2.19
VPS8Q8N3P4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.4□□□□□ -2.19
VPS8Q8N3P4 AL773524.1-201ENST00000614065 229 ntBASIC1.4□□□□□ -2.19
VPS8Q8N3P4 AC025263.3-201ENST00000622965 1396 ntBASIC1.39□□□□□ -2.19
VPS8Q8N3P4 RNU6-173P-201ENST00000364215 104 ntBASIC1.39□□□□□ -2.19
VPS8Q8N3P4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.39□□□□□ -2.19
VPS8Q8N3P4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.39□□□□□ -2.19
VPS8Q8N3P4 RPL30P4-201ENST00000429309 333 ntBASIC1.39□□□□□ -2.19
VPS8Q8N3P4 AC016691.1-201ENST00000441321 413 ntBASIC1.39□□□□□ -2.19
VPS8Q8N3P4 CBX3P8-201ENST00000532412 525 ntBASIC1.39□□□□□ -2.19
VPS8Q8N3P4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS8Q8N3P4 CBX3P7-201ENST00000532876 502 ntBASIC1.39□□□□□ -2.19
VPS8Q8N3P4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS8Q8N3P4 MIR6857-201ENST00000613267 93 ntBASIC1.39□□□□□ -2.19
VPS8Q8N3P4 AP003399.1-201ENST00000637534 361 ntBASIC1.39□□□□□ -2.19
VPS8Q8N3P4 RNU6-582P-201ENST00000362989 107 ntBASIC1.38□□□□□ -2.19
VPS8Q8N3P4 RNY1-201ENST00000364228 113 ntBASIC1.38□□□□□ -2.19
VPS8Q8N3P4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS8Q8N3P4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS8Q8N3P4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.38□□□□□ -2.19
VPS8Q8N3P4 NDUFA5P10-201ENST00000432147 357 ntBASIC1.38□□□□□ -2.19
VPS8Q8N3P4 RPS15AP17-201ENST00000470598 390 ntBASIC1.38□□□□□ -2.19
VPS8Q8N3P4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS8Q8N3P4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS8Q8N3P4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS8Q8N3P4 POLR2KP1-201ENST00000553226 168 ntBASIC1.38□□□□□ -2.19
VPS8Q8N3P4 AP002826.1-201ENST00000608835 315 ntBASIC1.38□□□□□ -2.19
VPS8Q8N3P4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.37□□□□□ -2.19
VPS8Q8N3P4 PRRC2CP1-201ENST00000404428 159 ntBASIC1.37□□□□□ -2.19
VPS8Q8N3P4 AL714022.1-201ENST00000439897 151 ntBASIC1.37□□□□□ -2.19
VPS8Q8N3P4 SNRPFP3-201ENST00000457792 225 ntBASIC1.37□□□□□ -2.19
VPS8Q8N3P4 AC116337.2-201ENST00000477662 156 ntBASIC1.37□□□□□ -2.19
VPS8Q8N3P4 AC021146.2-201ENST00000504736 556 ntBASIC1.37□□□□□ -2.19
VPS8Q8N3P4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS8Q8N3P4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS8Q8N3P4 AC233266.2-201ENST00000567067 528 ntBASIC1.37□□□□□ -2.19
VPS8Q8N3P4 MIR5000-201ENST00000577717 103 ntBASIC1.37□□□□□ -2.19
VPS8Q8N3P4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.37□□□□□ -2.19
VPS8Q8N3P4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS8Q8N3P4 AP002791.1-201ENST00000623291 381 ntBASIC1.37□□□□□ -2.19
VPS8Q8N3P4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS8Q8N3P4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS8Q8N3P4 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
VPS8Q8N3P4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS8Q8N3P4 AC096920.1-201ENST00000423991 241 ntBASIC1.36□□□□□ -2.19
VPS8Q8N3P4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.36□□□□□ -2.19
VPS8Q8N3P4 AC027575.1-201ENST00000481064 460 ntBASIC1.36□□□□□ -2.19
VPS8Q8N3P4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS8Q8N3P4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS8Q8N3P4 AC084033.1-201ENST00000550830 633 ntBASIC1.36□□□□□ -2.19
VPS8Q8N3P4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS8Q8N3P4 MIR4698-201ENST00000577795 80 ntBASIC1.36□□□□□ -2.19
VPS8Q8N3P4 AP003072.5-201ENST00000623872 773 ntBASIC1.36□□□□□ -2.19
VPS8Q8N3P4 AC007785.2-201ENST00000598627 1916 ntBASIC1.36□□□□□ -2.19
VPS8Q8N3P4 RNU6-1197P-201ENST00000391183 107 ntBASIC1.35□□□□□ -2.19
VPS8Q8N3P4 RNU11-5P-201ENST00000391216 129 ntBASIC1.35□□□□□ -2.19
VPS8Q8N3P4 RNA5SP450-201ENST00000411206 102 ntBASIC1.35□□□□□ -2.19
VPS8Q8N3P4 OR9R1P-201ENST00000412200 877 ntBASIC1.35□□□□□ -2.19
VPS8Q8N3P4 AL133384.1-201ENST00000412744 351 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms