Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AL451050.1-201ENST00000450126 415 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 AC107399.1-201ENST00000451226 265 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.94□□□□□ -1.62
USP48Q86UV5 AC006517.1-201ENST00000480485 328 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 RPL39P5-202ENST00000512505 151 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USP48Q86UV5 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.94□□□□□ -1.62
USP48Q86UV5 RNU1-95P-201ENST00000516357 160 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 RNU1-128P-201ENST00000516704 160 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 RNU6-1088P-201ENST00000516850 104 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 SNORA25.17-201ENST00000517184 124 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.94□□□□□ -1.62
USP48Q86UV5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.94□□□□□ -1.62
USP48Q86UV5 MED28P6-201ENST00000558776 231 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.94□□□□□ -1.62
USP48Q86UV5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.94□□□□□ -1.62
USP48Q86UV5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.94□□□□□ -1.62
USP48Q86UV5 POLR3GP2-201ENST00000588366 668 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.94□□□□□ -1.62
USP48Q86UV5 SNRPGP17-201ENST00000603780 214 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.94□□□□□ -1.62
USP48Q86UV5 AP001330.4-201ENST00000604350 154 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.94□□□□□ -1.62
USP48Q86UV5 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.94□□□□□ -1.62
USP48Q86UV5 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP48Q86UV5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.94□□□□□ -1.62
USP48Q86UV5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.94□□□□□ -1.62
USP48Q86UV5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP48Q86UV5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.93□□□□□ -1.62
USP48Q86UV5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.93□□□□□ -1.62
USP48Q86UV5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
USP48Q86UV5 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP48Q86UV5 SNORA57.3-201ENST00000411095 141 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 AL139396.1-201ENST00000421137 167 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP48Q86UV5 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.93□□□□□ -1.62
USP48Q86UV5 AC005019.1-201ENST00000436455 431 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 TBCAP1-201ENST00000436520 327 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 USP9YP7-201ENST00000436723 430 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.93□□□□□ -1.62
USP48Q86UV5 NDUFS5P3-201ENST00000450668 321 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.93□□□□□ -1.62
USP48Q86UV5 USP9YP32-201ENST00000452432 430 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 AC087588.1-201ENST00000462203 316 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP48Q86UV5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.93□□□□□ -1.62
USP48Q86UV5 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.93□□□□□ -1.62
USP48Q86UV5 AL359273.1-201ENST00000510918 627 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 AC023141.12-201ENST00000512399 199 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.93□□□□□ -1.62
USP48Q86UV5 RNU6-914P-201ENST00000516749 109 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 RNU6-566P-201ENST00000516790 107 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.93□□□□□ -1.62
USP48Q86UV5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.93□□□□□ -1.62
USP48Q86UV5 AL355810.1-201ENST00000614629 552 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 AC022418.1-201ENST00000624118 445 ntBASIC4.93□□□□□ -1.62
USP48Q86UV5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP48Q86UV5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP48Q86UV5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.93□□□□□ -1.62
USP48Q86UV5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
USP48Q86UV5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP48Q86UV5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP48Q86UV5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP48Q86UV5 AC073346.2-201ENST00000624724 2058 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.92□□□□□ -1.62
USP48Q86UV5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP48Q86UV5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP48Q86UV5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 Y_RNA.212-201ENST00000364177 102 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 Y_RNA.259-201ENST00000364619 101 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 Y_RNA.315-201ENST00000365117 102 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 Y_RNA.339-201ENST00000365325 102 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 RNU6-1297P-201ENST00000384415 104 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 MIR548P-201ENST00000408336 84 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 MIR548K-201ENST00000408406 116 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 MIR548F5-201ENST00000408421 86 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 MIR1290-201ENST00000408735 78 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 RNU4-14P-201ENST00000410858 122 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 AC074085.1-201ENST00000413598 418 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 VN1R36P-201ENST00000414936 291 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.92□□□□□ -1.62
USP48Q86UV5 AF228730.2-201ENST00000438784 848 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 TXNP1-201ENST00000441872 371 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 Y_RNA.639-201ENST00000458981 102 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 RPL7P43-201ENST00000478876 753 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 AC012181.1-201ENST00000479895 423 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 SNORA14.1-201ENST00000516113 141 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 RNU6-559P-201ENST00000516151 98 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 RANP9-201ENST00000519957 271 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.92□□□□□ -1.62
USP48Q86UV5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.92□□□□□ -1.62
USP48Q86UV5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.92□□□□□ -1.62
USP48Q86UV5 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.92□□□□□ -1.62
USP48Q86UV5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.92□□□□□ -1.62
USP48Q86UV5 FP236240.3-201ENST00000623061 327 ntBASIC4.92□□□□□ -1.62
USP48Q86UV5 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
USP48Q86UV5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
USP48Q86UV5 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
USP48Q86UV5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms