Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.36□□□□□ -2.35
RNF213Q63HN8 AC025465.4-201ENST00000513422 638 ntBASIC0.36□□□□□ -2.35
RNF213Q63HN8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.36□□□□□ -2.35
RNF213Q63HN8 RNU1-104P-201ENST00000517280 175 ntBASIC0.36□□□□□ -2.35
RNF213Q63HN8 AC026371.1-201ENST00000551867 419 ntBASIC0.36□□□□□ -2.35
RNF213Q63HN8 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC0.36□□□□□ -2.35
RNF213Q63HN8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.36□□□□□ -2.35
RNF213Q63HN8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.36□□□□□ -2.35
RNF213Q63HN8 AC138627.2-201ENST00000624202 601 ntBASIC0.36□□□□□ -2.35
RNF213Q63HN8 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.36□□□□□ -2.35
RNF213Q63HN8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
RNF213Q63HN8 RNU6-119P-201ENST00000364882 107 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 HSPE1P24-201ENST00000450782 238 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 RPS27AP8-201ENST00000452665 445 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC012170.1-201ENST00000495139 359 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC090897.2-201ENST00000581715 130 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 MIR203B-201ENST00000636080 86 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 MIR4320-201ENST00000636981 65 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 RNU6-603P-201ENST00000411403 107 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC004022.2-201ENST00000413824 193 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 AL118496.1-201ENST00000440201 1812 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 HMGB3P10-201ENST00000434734 572 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AP1S2P1-201ENST00000457344 379 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 SNORD54-201ENST00000459159 67 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 AP003484.1-201ENST00000530974 250 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC022880.1-201ENST00000534017 973 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC093027.1-201ENST00000546698 429 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC136932.1-201ENST00000574771 208 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC023932.2-201ENST00000603176 175 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC000123.2-201ENST00000623124 461 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 TPTE2P4-201ENST00000258589 1605 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
RNF213Q63HN8 Y_RNA.117-201ENST00000363294 101 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 AP003355.1-201ENST00000518956 587 ntBASIC0.35□□□□□ -2.35
RNF213Q63HN8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.35□□□□□ -2.35
RNF213Q63HN8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
RNF213Q63HN8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC0.34□□□□□ -2.35
RNF213Q63HN8 RPL7P18-201ENST00000478965 734 ntBASIC0.34□□□□□ -2.35
RNF213Q63HN8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
RNF213Q63HN8 HSPE1P20-201ENST00000538133 289 ntBASIC0.34□□□□□ -2.35
RNF213Q63HN8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.34□□□□□ -2.35
RNF213Q63HN8 SNORD49B-201ENST00000365172 72 ntBASIC0.34□□□□□ -2.35
RNF213Q63HN8 AC092745.2-202ENST00000411880 369 ntBASIC0.34□□□□□ -2.35
RNF213Q63HN8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC0.34□□□□□ -2.35
RNF213Q63HN8 AC114322.1-201ENST00000506771 926 ntBASIC0.34□□□□□ -2.35
RNF213Q63HN8 AC025857.1-201ENST00000525252 377 ntBASIC0.34□□□□□ -2.35
RNF213Q63HN8 AL133393.1-201ENST00000603277 287 ntBASIC0.34□□□□□ -2.35
RNF213Q63HN8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.34□□□□□ -2.35
RNF213Q63HN8 RNA5SP295-201ENST00000362655 121 ntBASIC0.34□□□□□ -2.36
RNF213Q63HN8 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.36
RNF213Q63HN8 RPS20P15-201ENST00000412792 311 ntBASIC0.34□□□□□ -2.36
RNF213Q63HN8 Z75741.2-201ENST00000417272 1167 ntBASIC0.34□□□□□ -2.36
RNF213Q63HN8 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.34□□□□□ -2.36
RNF213Q63HN8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.36
RNF213Q63HN8 MIR548AX-201ENST00000580117 73 ntBASIC0.34□□□□□ -2.36
RNF213Q63HN8 AC021646.1-201ENST00000605469 484 ntBASIC0.34□□□□□ -2.36
RNF213Q63HN8 CCT4P2-201ENST00000233836 1548 ntBASIC0.34□□□□□ -2.36
RNF213Q63HN8 RPL23AP95-201ENST00000426806 265 ntBASIC0.34□□□□□ -2.36
RNF213Q63HN8 MTND5P15-201ENST00000434246 349 ntBASIC0.34□□□□□ -2.36
RNF213Q63HN8 AL358794.1-201ENST00000445689 381 ntBASIC0.34□□□□□ -2.36
RNF213Q63HN8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.34□□□□□ -2.36
RNF213Q63HN8 AC010625.1-201ENST00000511296 403 ntBASIC0.34□□□□□ -2.36
RNF213Q63HN8 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.34□□□□□ -2.36
RNF213Q63HN8 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.34□□□□□ -2.36
RNF213Q63HN8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
RNF213Q63HN8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.33□□□□□ -2.36
RNF213Q63HN8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.33□□□□□ -2.36
RNF213Q63HN8 HMGB3P17-201ENST00000504195 649 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 AC048346.1-201ENST00000510247 144 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.33□□□□□ -2.36
RNF213Q63HN8 AP001180.6-201ENST00000584918 159 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 AL031601.2-202ENST00000622650 282 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 AC090617.7-201ENST00000623952 126 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 AC068620.4-201ENST00000636730 1182 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 Y_RNA.475-201ENST00000384345 101 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 RNA5SP63-201ENST00000391225 112 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.33□□□□□ -2.36
RNF213Q63HN8 SUMO2P2-201ENST00000456482 255 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 UBE2L4-201ENST00000587688 464 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 AC140725.3-201ENST00000616193 880 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 AC073592.7-201ENST00000623659 507 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 XIAPP3-201ENST00000312918 795 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.33□□□□□ -2.36
RNF213Q63HN8 AL022238.1-201ENST00000442557 355 ntBASIC0.33□□□□□ -2.36
RNF213Q63HN8 CFTRP1-201ENST00000456646 183 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms