Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AC008669.1-201ENST00000565823 2178 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 U3.6-201ENST00000363622 211 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 RNU6-512P-201ENST00000364438 103 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 RNU6-946P-201ENST00000383878 107 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 MIR558-201ENST00000384920 94 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 RPL17P50-201ENST00000396131 546 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 Z92545.1-201ENST00000411782 234 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AC244505.4-201ENST00000434905 287 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AL714022.1-201ENST00000439897 151 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 SSXP5-201ENST00000443473 287 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AL360221.1-201ENST00000445989 335 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 FABP5P15-201ENST00000453566 214 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 RPL26P9-201ENST00000457466 433 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 RPS26P21-201ENST00000475397 348 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AC117522.1-201ENST00000509821 380 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 RNA5SP385-201ENST00000515947 110 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 RNA5SP471-201ENST00000516971 106 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 UBL5P2-201ENST00000583788 219 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AC068790.2-201ENST00000602601 557 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AL133393.1-201ENST00000603277 287 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AL355598.1-201ENST00000604169 202 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AC064872.1-201ENST00000604823 1072 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AC099506.2-201ENST00000623074 221 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AC090582.1-201ENST00000636321 199 ntBASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.29□□□□□ -1.88
SNX30Q5VWJ9 AL390237.1-201ENST00000404226 1415 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 GABRG2-229ENST00000641017 3628 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AL353743.1-202ENST00000431724 1695 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 RNU6-14P-201ENST00000384630 106 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 RPL5P18-201ENST00000406671 891 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 RNU2-39P-201ENST00000410604 198 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AC096664.2-201ENST00000411843 406 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 RPL36AP53-201ENST00000432891 316 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AC079781.2-201ENST00000446424 169 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AP000936.2-201ENST00000447151 681 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 CECR9-201ENST00000453421 199 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 RPL12P25-201ENST00000455592 494 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 RN7SL75P-201ENST00000461926 281 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 RNA5SP165-201ENST00000517142 115 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 MIR3167-201ENST00000579623 85 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 MIR4506-201ENST00000584693 77 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 RN7SKP299-201ENST00000606679 301 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AC004908.3-201ENST00000610248 625 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AC010678.1-201ENST00000614118 713 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AC068880.5-201ENST00000624331 290 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 AP003399.1-201ENST00000637534 361 ntBASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNX30Q5VWJ9 MTND5P19-201ENST00000424872 1794 ntBASIC3.28□□□□□ -1.89
SNX30Q5VWJ9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX30Q5VWJ9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX30Q5VWJ9 MIR422A-201ENST00000362286 90 ntBASIC3.27□□□□□ -1.89
SNX30Q5VWJ9 RNU6-288P-201ENST00000363690 104 ntBASIC3.27□□□□□ -1.89
SNX30Q5VWJ9 RNU6-641P-201ENST00000384006 107 ntBASIC3.27□□□□□ -1.89
SNX30Q5VWJ9 SNORD15B-201ENST00000384714 146 ntBASIC3.27□□□□□ -1.89
SNX30Q5VWJ9 MIR128-1-201ENST00000384921 82 ntBASIC3.27□□□□□ -1.89
SNX30Q5VWJ9 MIR23A-201ENST00000385245 73 ntBASIC3.27□□□□□ -1.89
SNX30Q5VWJ9 MIR301A-201ENST00000385261 86 ntBASIC3.27□□□□□ -1.89
SNX30Q5VWJ9 AL139397.2-201ENST00000404529 772 ntBASIC3.27□□□□□ -1.89
SNX30Q5VWJ9 RN7SKP220-201ENST00000410611 288 ntBASIC3.27□□□□□ -1.89
SNX30Q5VWJ9 RPS12P24-201ENST00000412619 387 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms