Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SNORD115-38-201ENST00000365037 82 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 SNORA29-201ENST00000384183 140 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 Y_RNA.466-201ENST00000384294 113 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 MIR487A-201ENST00000385009 80 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 RPL11P3-201ENST00000395256 523 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 AC245047.4-201ENST00000433189 144 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 snoU13.29-201ENST00000459370 104 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 AC087588.1-201ENST00000462203 316 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 RN7SL97P-201ENST00000486780 299 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 AC006445.2-201ENST00000510061 472 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 CYCSP23-201ENST00000519781 313 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 AC126177.5-201ENST00000549599 178 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.9□□□□□ -1.46
VARS2Q5ST30 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC5.9□□□□□ -1.46
VARS2Q5ST30 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.9□□□□□ -1.46
VARS2Q5ST30 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC5.9□□□□□ -1.46
VARS2Q5ST30 AC010999.1-201ENST00000611856 324 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 MIR3202-2-201ENST00000635980 79 ntBASIC5.9□□□□□ -1.46
VARS2Q5ST30 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
VARS2Q5ST30 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.47
VARS2Q5ST30 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VARS2Q5ST30 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VARS2Q5ST30 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.9□□□□□ -1.47
VARS2Q5ST30 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.9□□□□□ -1.47
VARS2Q5ST30 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VARS2Q5ST30 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.47
VARS2Q5ST30 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.47
VARS2Q5ST30 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.9□□□□□ -1.47
VARS2Q5ST30 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VARS2Q5ST30 RNA5SP326-201ENST00000363209 110 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 RNY3P5-201ENST00000384127 102 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 RNF10P1-201ENST00000418589 369 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 SRSF1P1-201ENST00000424058 520 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 TMEM183AP1-205ENST00000432739 290 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 AC112498.1-201ENST00000444401 332 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 AL133244.1-201ENST00000456007 258 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 AC146507.2-201ENST00000460608 476 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 AC012158.1-204ENST00000483430 465 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 RNU6-1198P-201ENST00000516904 67 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 AC137627.1-201ENST00000545761 289 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 AL138963.2-201ENST00000605137 226 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 AC015813.4-201ENST00000610469 179 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 AC100827.5-201ENST00000615883 426 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 MTND5P18-201ENST00000445624 1801 ntBASIC5.89□□□□□ -1.47
VARS2Q5ST30 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
VARS2Q5ST30 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VARS2Q5ST30 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VARS2Q5ST30 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VARS2Q5ST30 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
VARS2Q5ST30 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
VARS2Q5ST30 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.88□□□□□ -1.47
VARS2Q5ST30 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARS2Q5ST30 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.88□□□□□ -1.47
VARS2Q5ST30 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VARS2Q5ST30 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VARS2Q5ST30 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
VARS2Q5ST30 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VARS2Q5ST30 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARS2Q5ST30 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
VARS2Q5ST30 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARS2Q5ST30 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARS2Q5ST30 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARS2Q5ST30 SNORA72.4-201ENST00000384174 132 ntBASIC5.88□□□□□ -1.47
VARS2Q5ST30 RNU1-136P-201ENST00000384181 164 ntBASIC5.88□□□□□ -1.47
VARS2Q5ST30 Y_RNA.498-201ENST00000384460 102 ntBASIC5.88□□□□□ -1.47
VARS2Q5ST30 AC007161.1-204ENST00000423039 460 ntBASIC5.88□□□□□ -1.47
VARS2Q5ST30 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC5.88□□□□□ -1.47
VARS2Q5ST30 AC073261.1-201ENST00000429409 121 ntBASIC5.88□□□□□ -1.47
VARS2Q5ST30 KRT8P51-201ENST00000438938 274 ntBASIC5.88□□□□□ -1.47
VARS2Q5ST30 RPL35AP15-201ENST00000468042 339 ntBASIC5.88□□□□□ -1.47
VARS2Q5ST30 AC072052.1-201ENST00000496556 306 ntBASIC5.88□□□□□ -1.47
VARS2Q5ST30 RNU6-436P-201ENST00000516171 114 ntBASIC5.88□□□□□ -1.47
VARS2Q5ST30 MIR4646-201ENST00000580775 63 ntBASIC5.88□□□□□ -1.47
VARS2Q5ST30 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARS2Q5ST30 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARS2Q5ST30 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.88□□□□□ -1.47
VARS2Q5ST30 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARS2Q5ST30 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.88□□□□□ -1.47
VARS2Q5ST30 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.88□□□□□ -1.47
VARS2Q5ST30 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VARS2Q5ST30 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
VARS2Q5ST30 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VARS2Q5ST30 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms