Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 MTND5P33-201ENST00000571250 1450 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 CCT4P2-201ENST00000233836 1548 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 U8.14-201ENST00000390843 143 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 MIR1305-201ENST00000408300 86 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 Z85995.1-201ENST00000415547 335 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 VPS26BP1-201ENST00000417155 755 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 BX276092.3-201ENST00000424182 230 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AL714022.1-201ENST00000439897 151 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 GSTA11P-201ENST00000452866 669 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 ATG12P2-201ENST00000456830 416 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 MTCO1P42-201ENST00000457379 726 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC116337.2-201ENST00000477662 156 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC068587.2-201ENST00000478386 781 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 RPL36AP51-201ENST00000487216 318 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC026436.1-201ENST00000510537 270 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 RNU6-1129P-201ENST00000515964 104 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 SCARNA15.2-201ENST00000516409 127 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 MTATP6P15-201ENST00000527233 835 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC124947.2-202ENST00000552735 133 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 MTCO3P13-201ENST00000577757 781 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC090132.2-201ENST00000615881 347 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AC009268.2-201ENST00000621925 457 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 AL159972.1-201ENST00000625150 448 ntBASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.84□□□□□ -1.95
SHROOM1Q2M3G4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.84□□□□□ -1.96
SHROOM1Q2M3G4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.84□□□□□ -1.96
SHROOM1Q2M3G4 AC009902.3-201ENST00000606235 2172 ntBASIC2.84□□□□□ -1.96
SHROOM1Q2M3G4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.84□□□□□ -1.96
SHROOM1Q2M3G4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 Z82209.1-201ENST00000422141 2135 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 RNA5SP456-201ENST00000364002 114 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AL356057.2-201ENST00000403318 432 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AL513475.1-201ENST00000406602 315 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AL139415.2-201ENST00000431968 163 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 LARP1BP3-201ENST00000437229 869 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 RPS15AP7-201ENST00000439294 405 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 RPL9P33-201ENST00000484311 566 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AF131216.2-201ENST00000512316 564 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 RNU6-390P-201ENST00000516259 103 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 RNU6-759P-201ENST00000516740 103 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 RNU6-678P-201ENST00000516832 109 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 RNA5SP291-201ENST00000517222 105 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AC021269.2-201ENST00000532318 330 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AC008015.1-201ENST00000555505 465 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 MTND3P12-201ENST00000559068 328 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AF038458.1-201ENST00000588406 262 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AC008751.2-201ENST00000597885 980 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AC013553.2-201ENST00000604244 589 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 AC135507.1-201ENST00000607214 561 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 TUG1_2.1-201ENST00000614234 87 ntBASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHROOM1Q2M3G4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 DDX10P1-201ENST00000448545 1933 ntBASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 SNORA68.1-201ENST00000364537 132 ntBASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 RNU6-809P-201ENST00000384461 107 ntBASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 Y_RNA.560-201ENST00000384689 102 ntBASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 MIR592-201ENST00000384959 97 ntBASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 MTCYBP36-201ENST00000404146 440 ntBASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 RPL7P37-201ENST00000425095 738 ntBASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 MTND5P25-201ENST00000430499 799 ntBASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 MTCYBP39-201ENST00000437562 491 ntBASIC2.82□□□□□ -1.96
SHROOM1Q2M3G4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms