| FOXC1 | Q12948 | AL450992.2-201 | ENST00000434182 | 506 nt | TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | LINC01073-201 | ENST00000441659 | 149 nt | TSL 3 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AL691497.1-201 | ENST00000443270 | 449 nt | TSL 2 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC112498.1-201 | ENST00000444401 | 332 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AL121914.1-201 | ENST00000450188 | 156 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | ZNF562-202 | ENST00000453372 | 2111 nt | APPRIS P3 TSL 3 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | RNU6-625P-201 | ENST00000459412 | 107 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC140172.1-201 | ENST00000502928 | 141 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | TMEM132D-AS1-202 | ENST00000510001 | 293 nt | TSL 1 (best) BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | RN7SKP260-201 | ENST00000516907 | 149 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC016256.1-201 | ENST00000547971 | 354 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC018448.1-201 | ENST00000552843 | 316 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | LINC02309-201 | ENST00000553679 | 207 nt | TSL 3 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC027130.1-201 | ENST00000564490 | 686 nt | TSL 2 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AL590392.1-201 | ENST00000604960 | 446 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AL391903.3-201 | ENST00000612158 | 163 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC106754.2-201 | ENST00000623006 | 233 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | FTO-223 | ENST00000640179 | 210 nt | TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | OR10A3-202 | ENST00000642047 | 2650 nt | APPRIS P1 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | ARHGEF12-213 | ENST00000532993 | 8753 nt | TSL 1 (best) BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | OTOGL-204 | ENST00000547103 | 8032 nt | APPRIS ALT2 TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | FAM35A-202 | ENST00000298786 | 3614 nt | TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | PTK2-206 | ENST00000517712 | 3351 nt | TSL 2 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AL353796.1-201 | ENST00000561542 | 3241 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | SPARCL1-202 | ENST00000418378 | 2994 nt | APPRIS P1 TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | DTHD1-205 | ENST00000507598 | 2606 nt | TSL 1 (best) BASIC | 5.1 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | SPAM1-206 | ENST00000460182 | 2154 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | PCDH11X-202 | ENST00000361655 | 4126 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC069528.2-201 | ENST00000624849 | 1991 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC092070.2-203 | ENST00000598377 | 3644 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | EXOC1-201 | ENST00000346134 | 3357 nt | APPRIS P4 TSL 2 BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | PLCXD3-202 | ENST00000377801 | 7704 nt | APPRIS P1 TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC093671.1-201 | ENST00000624981 | 2929 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | LY86-AS1-202 | ENST00000435641 | 2819 nt | TSL 2 BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC232271.1-201 | ENST00000602455 | 2715 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC112243.1-201 | ENST00000623949 | 3851 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | RNU6-712P-201 | ENST00000410558 | 100 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | RNU4-64P-201 | ENST00000410795 | 131 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | CYCSP10-201 | ENST00000417973 | 294 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC138623.1-201 | ENST00000418060 | 216 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AL358075.3-201 | ENST00000426289 | 226 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | RPS27AP12-201 | ENST00000429552 | 465 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AL135790.2-201 | ENST00000437701 | 267 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AL033380.1-201 | ENST00000442781 | 421 nt | TSL 2 BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | RN7SL165P-201 | ENST00000477476 | 291 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC146944.2-203 | ENST00000502493 | 354 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | LINC02149-201 | ENST00000511443 | 558 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC139495.1-202 | ENST00000513164 | 354 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | RNU6-1198P-201 | ENST00000516904 | 67 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | RNA5SP373-201 | ENST00000517271 | 95 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | RNU2-60P-201 | ENST00000517290 | 128 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | PPFIA2-219 | ENST00000550359 | 3808 nt | TSL 2 BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | UBE2Q2P8-201 | ENST00000560644 | 102 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | LINC00921-201 | ENST00000572123 | 243 nt | TSL 5 BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC091042.1-201 | ENST00000579213 | 173 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | 5_8S_rRNA.1-201 | ENST00000614365 | 152 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC131238.1-201 | ENST00000617135 | 328 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC068724.3-201 | ENST00000625906 | 87 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | SNORA43.4-201 | ENST00000629559 | 138 nt | BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | SLC10A7-203 | ENST00000432059 | 3747 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | MARCH1-202 | ENST00000339875 | 2476 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | EPB41L2-220 | ENST00000528282 | 3663 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | LARP1B-201 | ENST00000326639 | 4891 nt | APPRIS P1 TSL 5 BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | NAT1-203 | ENST00000517492 | 2280 nt | APPRIS P1 TSL 2 BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | AC090826.1-202 | ENST00000562009 | 3337 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.59 | | |
| FOXC1 | Q12948 | RUFY3-202 | ENST00000381006 | 3098 nt | APPRIS P1 TSL 5 BASIC | 5.09 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | MUC17-201 | ENST00000306151 | 14247 nt | APPRIS P1 TSL 1 (best) BASIC | 5.09 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | DSG2-AS1-202 | ENST00000583706 | 2024 nt | TSL 5 BASIC | 5.09 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | AC108750.1-201 | ENST00000637986 | 2706 nt | APPRIS P1 TSL 4 BASIC | 5.09 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | TTF2-201 | ENST00000369466 | 9462 nt | APPRIS P1 TSL 1 (best) BASIC | 5.09 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | LINC00906-206 | ENST00000589921 | 3444 nt | TSL 1 (best) BASIC | 5.09 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | FAM91A3P-201 | ENST00000456826 | 2544 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | CFL2-201 | ENST00000298159 | 6747 nt | APPRIS P1 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | ZFYVE16-206 | ENST00000510158 | 6680 nt | APPRIS P1 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | OR8A1-203 | ENST00000641670 | 5709 nt | APPRIS P1 BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | ADGRL3-210 | ENST00000508946 | 4758 nt | APPRIS ALT2 TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | TM4SF20-201 | ENST00000304568 | 2296 nt | APPRIS P1 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | ZFX-211 | ENST00000539115 | 6801 nt | TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | IFI16-208 | ENST00000448393 | 2245 nt | APPRIS ALT2 TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | OR2L3-201 | ENST00000359959 | 2792 nt | APPRIS P1 BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | AKAP7-209 | ENST00000541650 | 2008 nt | TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | OGT-201 | ENST00000373701 | 3310 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | AL355834.1-201 | ENST00000556602 | 3965 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | DNAH12-203 | ENST00000389536 | 2613 nt | TSL 5 BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | RNU6-640P-201 | ENST00000363693 | 105 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | Y_RNA.329-201 | ENST00000365209 | 107 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | Y_RNA.348-201 | ENST00000365403 | 103 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | MIR15B-201 | ENST00000385045 | 98 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | AC009963.1-201 | ENST00000417265 | 157 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | AL353689.2-201 | ENST00000433837 | 440 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | AL158147.1-201 | ENST00000443970 | 75 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | AC079760.1-201 | ENST00000456952 | 202 nt | TSL 3 BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | RPL7AP28-201 | ENST00000464513 | 571 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | KRTAP5-14P-201 | ENST00000502328 | 121 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | RNU6-1007P-201 | ENST00000516586 | 107 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | SNORA31.19-201 | ENST00000517079 | 126 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | CYCSP23-201 | ENST00000519781 | 313 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | AC136628.3-201 | ENST00000521868 | 290 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | Y_RNA.757-201 | ENST00000578934 | 114 nt | BASIC | 5.08 | □□□□□ -1.6 | | |
| FOXC1 | Q12948 | MIR3667-201 | ENST00000581025 | 74 nt | BASIC | 5.08 | □□□□□ -1.6 | | |