Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AP003122.4-201ENST00000530980 758 ntBASIC2.98□□□□□ -1.93
IRX4P78413 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.98□□□□□ -1.93
IRX4P78413 RPL21P5-201ENST00000554662 472 ntBASIC2.98□□□□□ -1.93
IRX4P78413 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.98□□□□□ -1.93
IRX4P78413 CYCSP39-201ENST00000565821 309 ntBASIC2.98□□□□□ -1.93
IRX4P78413 HMGN1P30-201ENST00000589286 268 ntBASIC2.98□□□□□ -1.93
IRX4P78413 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.98□□□□□ -1.93
IRX4P78413 AC108479.2-201ENST00000617314 601 ntBASIC2.98□□□□□ -1.93
IRX4P78413 AC009509.4-201ENST00000619202 509 ntBASIC2.98□□□□□ -1.93
IRX4P78413 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.98□□□□□ -1.93
IRX4P78413 MIR6733-201ENST00000635723 61 ntBASIC2.98□□□□□ -1.93
IRX4P78413 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
IRX4P78413 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
IRX4P78413 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
IRX4P78413 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.97□□□□□ -1.93
IRX4P78413 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
IRX4P78413 Y_RNA.194-201ENST00000363985 102 ntBASIC2.97□□□□□ -1.93
IRX4P78413 RNU6-270P-201ENST00000364131 105 ntBASIC2.97□□□□□ -1.93
IRX4P78413 RNU4-75P-201ENST00000364621 146 ntBASIC2.97□□□□□ -1.93
IRX4P78413 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.97□□□□□ -1.93
IRX4P78413 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.97□□□□□ -1.93
IRX4P78413 RNU6-432P-201ENST00000384196 109 ntBASIC2.97□□□□□ -1.93
IRX4P78413 MIR181B1-201ENST00000385240 110 ntBASIC2.97□□□□□ -1.93
IRX4P78413 SNORA26.7-201ENST00000391288 122 ntBASIC2.97□□□□□ -1.93
IRX4P78413 SAR1AP2-201ENST00000392696 594 ntBASIC2.97□□□□□ -1.93
IRX4P78413 RPS3AP3-201ENST00000411933 242 ntBASIC2.97□□□□□ -1.93
IRX4P78413 MTND1P21-201ENST00000412991 285 ntBASIC2.97□□□□□ -1.93
IRX4P78413 CDK8P2-201ENST00000415020 547 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AL451074.5-201ENST00000415894 435 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.97□□□□□ -1.93
IRX4P78413 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.97□□□□□ -1.93
IRX4P78413 RPL7L1P10-201ENST00000427790 463 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.97□□□□□ -1.93
IRX4P78413 AL033528.1-201ENST00000453780 140 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.97□□□□□ -1.93
IRX4P78413 snoU13.28-201ENST00000459235 104 ntBASIC2.97□□□□□ -1.93
IRX4P78413 SNORD42A-201ENST00000459584 64 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AC126389.1-201ENST00000477436 290 ntBASIC2.97□□□□□ -1.93
IRX4P78413 TRBV12-1-201ENST00000479785 344 ntBASIC2.97□□□□□ -1.93
IRX4P78413 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
IRX4P78413 MTND3P5-201ENST00000512798 333 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AC114781.4-201ENST00000513707 639 ntBASIC2.97□□□□□ -1.93
IRX4P78413 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.97□□□□□ -1.93
IRX4P78413 RNA5SP76-201ENST00000516277 87 ntBASIC2.97□□□□□ -1.93
IRX4P78413 SCARNA15.2-201ENST00000516409 127 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AP003467.2-201ENST00000520175 319 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.97□□□□□ -1.93
IRX4P78413 AP003181.2-201ENST00000528941 181 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.97□□□□□ -1.93
IRX4P78413 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.97□□□□□ -1.93
IRX4P78413 AC103987.3-201ENST00000582071 292 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AC079089.3-201ENST00000603094 673 ntBASIC2.97□□□□□ -1.93
IRX4P78413 NUTF2P8-201ENST00000604593 363 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AC121334.2-201ENST00000605387 271 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AC007038.2-201ENST00000608095 740 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AC006566.1-201ENST00000608943 513 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AC004908.2-201ENST00000609090 574 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AL020991.1-201ENST00000612314 373 ntBASIC2.97□□□□□ -1.93
IRX4P78413 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
IRX4P78413 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.97□□□□□ -1.93
IRX4P78413 AC004696.1-201ENST00000614345 607 ntBASIC2.97□□□□□ -1.93
IRX4P78413 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
IRX4P78413 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
IRX4P78413 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.97□□□□□ -1.93
IRX4P78413 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.97□□□□□ -1.93
IRX4P78413 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
IRX4P78413 TPTE2P4-201ENST00000258589 1605 ntBASIC2.97□□□□□ -1.93
IRX4P78413 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.97□□□□□ -1.93
IRX4P78413 AL138713.1-201ENST00000624026 2130 ntBASIC2.96□□□□□ -1.93
IRX4P78413 FAM35CP-201ENST00000554755 2470 ntBASIC2.96□□□□□ -1.94
IRX4P78413 DDX10P1-201ENST00000448545 1933 ntBASIC2.96□□□□□ -1.94
IRX4P78413 RPL9P7-201ENST00000330965 580 ntBASIC2.96□□□□□ -1.94
IRX4P78413 RNU5A-8P-201ENST00000364102 114 ntBASIC2.96□□□□□ -1.94
IRX4P78413 OR5H15-201ENST00000383696 930 ntBASIC2.96□□□□□ -1.94
IRX4P78413 RNU6-1119P-201ENST00000384349 108 ntBASIC2.96□□□□□ -1.94
IRX4P78413 RNU6-348P-201ENST00000384386 107 ntBASIC2.96□□□□□ -1.94
IRX4P78413 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
IRX4P78413 DEFB108C-201ENST00000400154 252 ntBASIC2.96□□□□□ -1.94
IRX4P78413 RNA5SP508-201ENST00000411327 119 ntBASIC2.96□□□□□ -1.94
IRX4P78413 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.96□□□□□ -1.94
IRX4P78413 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.96□□□□□ -1.94
IRX4P78413 AC063976.3-201ENST00000426849 329 ntBASIC2.96□□□□□ -1.94
IRX4P78413 DLGAP5P1-201ENST00000430307 464 ntBASIC2.96□□□□□ -1.94
IRX4P78413 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.96□□□□□ -1.94
IRX4P78413 MTND6P13-201ENST00000443510 523 ntBASIC2.96□□□□□ -1.94
IRX4P78413 snoU109.1-201ENST00000459339 135 ntBASIC2.96□□□□□ -1.94
IRX4P78413 AC117440.1-201ENST00000474107 571 ntBASIC2.96□□□□□ -1.94
IRX4P78413 AL135752.1-201ENST00000479477 471 ntBASIC2.96□□□□□ -1.94
IRX4P78413 RPS15AP36-201ENST00000492022 382 ntBASIC2.96□□□□□ -1.94
IRX4P78413 AC091435.1-201ENST00000505442 584 ntBASIC2.96□□□□□ -1.94
IRX4P78413 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.96□□□□□ -1.94
IRX4P78413 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.96□□□□□ -1.94
IRX4P78413 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.96□□□□□ -1.94
IRX4P78413 NDUFB4P2-201ENST00000509515 391 ntBASIC2.96□□□□□ -1.94
IRX4P78413 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
IRX4P78413 Y_RNA.655-201ENST00000515919 96 ntBASIC2.96□□□□□ -1.94
IRX4P78413 RNU6-840P-201ENST00000517275 65 ntBASIC2.96□□□□□ -1.94
IRX4P78413 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.96□□□□□ -1.94
IRX4P78413 OR5G4P-201ENST00000525251 760 ntBASIC2.96□□□□□ -1.94
IRX4P78413 DNAJC8P1-201ENST00000554535 372 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms