Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
YBX1P67809 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
YBX1P67809 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.29□□□□□ -1.72
YBX1P67809 OR56B2P-202ENST00000641377 2453 ntBASIC4.29□□□□□ -1.72
YBX1P67809 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
YBX1P67809 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
YBX1P67809 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
YBX1P67809 Y_RNA.19-201ENST00000362462 99 ntBASIC4.28□□□□□ -1.72
YBX1P67809 SNORA51.11-201ENST00000384442 131 ntBASIC4.28□□□□□ -1.72
YBX1P67809 SNORD73A-201ENST00000386062 65 ntBASIC4.28□□□□□ -1.72
YBX1P67809 AL138885.1-201ENST00000405921 675 ntBASIC4.28□□□□□ -1.72
YBX1P67809 HSPE1P8-201ENST00000406997 288 ntBASIC4.28□□□□□ -1.72
YBX1P67809 ELOCP19-201ENST00000411919 318 ntBASIC4.28□□□□□ -1.72
YBX1P67809 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.28□□□□□ -1.72
YBX1P67809 RPS20P14-201ENST00000412545 360 ntBASIC4.28□□□□□ -1.72
YBX1P67809 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
YBX1P67809 AC004866.2-201ENST00000438285 481 ntBASIC4.28□□□□□ -1.72
YBX1P67809 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.28□□□□□ -1.72
YBX1P67809 AL590664.1-201ENST00000448065 339 ntBASIC4.28□□□□□ -1.72
YBX1P67809 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.28□□□□□ -1.72
YBX1P67809 RPL21P41-201ENST00000459863 264 ntBASIC4.28□□□□□ -1.72
YBX1P67809 RNU6-397P-201ENST00000516226 104 ntBASIC4.28□□□□□ -1.72
YBX1P67809 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.28□□□□□ -1.72
YBX1P67809 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.28□□□□□ -1.72
YBX1P67809 MIR6130-201ENST00000619419 109 ntBASIC4.28□□□□□ -1.72
YBX1P67809 MIR6830-201ENST00000636015 70 ntBASIC4.28□□□□□ -1.72
YBX1P67809 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
YBX1P67809 MAPK10-303ENST00000641324 3959 ntBASIC4.28□□□□□ -1.72
YBX1P67809 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
YBX1P67809 FAM91A3P-201ENST00000456826 2544 ntBASIC4.28□□□□□ -1.72
YBX1P67809 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
YBX1P67809 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
YBX1P67809 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.28□□□□□ -1.72
YBX1P67809 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.73
YBX1P67809 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
YBX1P67809 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
YBX1P67809 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
YBX1P67809 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.27□□□□□ -1.73
YBX1P67809 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
YBX1P67809 MIR331-201ENST00000362302 94 ntBASIC4.27□□□□□ -1.73
YBX1P67809 RNY1P16-201ENST00000363063 111 ntBASIC4.27□□□□□ -1.73
YBX1P67809 RNA5SP28-201ENST00000363841 119 ntBASIC4.27□□□□□ -1.73
YBX1P67809 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.27□□□□□ -1.73
YBX1P67809 Y_RNA.526-201ENST00000384572 110 ntBASIC4.27□□□□□ -1.73
YBX1P67809 RNU6-14P-201ENST00000384630 106 ntBASIC4.27□□□□□ -1.73
YBX1P67809 Y_RNA.562-201ENST00000384695 113 ntBASIC4.27□□□□□ -1.73
YBX1P67809 RNU6-33P-201ENST00000384793 107 ntBASIC4.27□□□□□ -1.73
YBX1P67809 MIR135A2-201ENST00000384854 100 ntBASIC4.27□□□□□ -1.73
YBX1P67809 RNU6-1093P-201ENST00000391194 107 ntBASIC4.27□□□□□ -1.73
YBX1P67809 SNORA57.1-201ENST00000391227 145 ntBASIC4.27□□□□□ -1.73
YBX1P67809 SDHCP2-201ENST00000398565 501 ntBASIC4.27□□□□□ -1.73
YBX1P67809 AL445529.1-201ENST00000398713 389 ntBASIC4.27□□□□□ -1.73
YBX1P67809 RNU6-174P-201ENST00000410406 106 ntBASIC4.27□□□□□ -1.73
YBX1P67809 BX842559.1-201ENST00000419615 532 ntBASIC4.27□□□□□ -1.73
YBX1P67809 AL137014.1-201ENST00000420490 1226 ntBASIC4.27□□□□□ -1.73
YBX1P67809 AL356387.2-201ENST00000422272 243 ntBASIC4.27□□□□□ -1.73
YBX1P67809 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.27□□□□□ -1.73
YBX1P67809 RPL29P29-201ENST00000448725 423 ntBASIC4.27□□□□□ -1.73
YBX1P67809 NUTF2P7-201ENST00000453086 375 ntBASIC4.27□□□□□ -1.73
YBX1P67809 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.27□□□□□ -1.73
YBX1P67809 RPL7AP28-201ENST00000464513 571 ntBASIC4.27□□□□□ -1.73
YBX1P67809 RNU6-138P-201ENST00000515952 107 ntBASIC4.27□□□□□ -1.73
YBX1P67809 RNU6-570P-201ENST00000517051 105 ntBASIC4.27□□□□□ -1.73
YBX1P67809 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.27□□□□□ -1.73
YBX1P67809 CBX3P8-201ENST00000532412 525 ntBASIC4.27□□□□□ -1.73
YBX1P67809 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.27□□□□□ -1.73
YBX1P67809 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.27□□□□□ -1.73
YBX1P67809 MIR3160-1-201ENST00000577972 85 ntBASIC4.27□□□□□ -1.73
YBX1P67809 MIR5692A1-201ENST00000580523 69 ntBASIC4.27□□□□□ -1.73
YBX1P67809 AL160281.1-201ENST00000605307 311 ntBASIC4.27□□□□□ -1.73
YBX1P67809 AP005019.3-201ENST00000620418 560 ntBASIC4.27□□□□□ -1.73
YBX1P67809 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
YBX1P67809 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
YBX1P67809 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
YBX1P67809 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.26□□□□□ -1.73
YBX1P67809 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
YBX1P67809 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
YBX1P67809 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.26□□□□□ -1.73
YBX1P67809 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.26□□□□□ -1.73
YBX1P67809 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.26□□□□□ -1.73
YBX1P67809 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.26□□□□□ -1.73
YBX1P67809 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.26□□□□□ -1.73
YBX1P67809 RNU6-371P-201ENST00000364283 108 ntBASIC4.26□□□□□ -1.73
YBX1P67809 RNU6-200P-201ENST00000364743 107 ntBASIC4.26□□□□□ -1.73
YBX1P67809 RNA5SP22-201ENST00000365393 109 ntBASIC4.26□□□□□ -1.73
YBX1P67809 RNU6-596P-201ENST00000365395 98 ntBASIC4.26□□□□□ -1.73
YBX1P67809 Y_RNA.478-201ENST00000384358 107 ntBASIC4.26□□□□□ -1.73
YBX1P67809 RNU1-44P-201ENST00000384453 163 ntBASIC4.26□□□□□ -1.73
YBX1P67809 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.26□□□□□ -1.73
YBX1P67809 AL132765.1-201ENST00000434165 553 ntBASIC4.26□□□□□ -1.73
YBX1P67809 AC073063.1-201ENST00000434352 607 ntBASIC4.26□□□□□ -1.73
YBX1P67809 HLA-N-201ENST00000437516 135 ntBASIC4.26□□□□□ -1.73
YBX1P67809 RPS3AP46-201ENST00000448352 682 ntBASIC4.26□□□□□ -1.73
YBX1P67809 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.26□□□□□ -1.73
YBX1P67809 FO393415.2-201ENST00000480085 343 ntBASIC4.26□□□□□ -1.73
YBX1P67809 AC108022.1-201ENST00000493466 478 ntBASIC4.26□□□□□ -1.73
YBX1P67809 RNU6-406P-201ENST00000516470 107 ntBASIC4.26□□□□□ -1.73
YBX1P67809 RNU6-789P-201ENST00000517105 102 ntBASIC4.26□□□□□ -1.73
YBX1P67809 AF186190.1-201ENST00000517470 480 ntBASIC4.26□□□□□ -1.73
YBX1P67809 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms