Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN20P56880 AP001596.2-201ENST00000608410 312 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN20P56880 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 AC091152.2-201ENST00000591628 2569 ntBASIC3.09□□□□□ -1.91
CLDN20P56880 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CLDN20P56880 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.09□□□□□ -1.92
CLDN20P56880 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CLDN20P56880 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
CLDN20P56880 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CLDN20P56880 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN20P56880 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CLDN20P56880 AC002546.1-201ENST00000588041 2504 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 RNU1-33P-201ENST00000364249 162 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 SNORA62.1-201ENST00000364287 154 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN20P56880 RNU6-190P-201ENST00000384154 102 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 RNU6-1158P-201ENST00000391167 107 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN20P56880 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN20P56880 AL109913.1-201ENST00000421173 514 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN20P56880 AL606489.2-201ENST00000433886 234 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 SETP5-201ENST00000437270 562 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 BNIP3P2-201ENST00000441221 577 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN20P56880 AL357552.1-201ENST00000445254 415 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN20P56880 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN20P56880 AC006512.1-201ENST00000468816 291 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 AC083798.1-201ENST00000472671 131 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 RPL36AP51-201ENST00000487216 318 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 RPL30P5-201ENST00000494923 336 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN20P56880 TTC39CP1-201ENST00000512513 755 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 SNORA40.12-201ENST00000516329 111 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 RNA5SP291-201ENST00000517222 105 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN20P56880 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN20P56880 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN20P56880 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN20P56880 MIR3944-201ENST00000581277 108 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 SRGNP1-201ENST00000603392 451 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 AC093788.1-201ENST00000609356 927 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 MIR8058-201ENST00000615737 89 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CLDN20P56880 U6.114-201ENST00000636407 96 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 MTND5P42-201ENST00000637720 498 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN20P56880 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN20P56880 API5P2-201ENST00000397055 1498 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 AC032011.1-201ENST00000611703 1549 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
CLDN20P56880 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN20P56880 MFSD8-233ENST00000641482 4860 ntBASIC3.08□□□□□ -1.92
CLDN20P56880 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN20P56880 ZNF807-201ENST00000328088 1707 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CLDN20P56880 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CLDN20P56880 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CLDN20P56880 MIR208A-201ENST00000362287 71 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 RNA5SP295-201ENST00000362655 121 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 RNA5SP197-201ENST00000363357 119 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 RNY4P14-201ENST00000363656 96 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 Y_RNA.402-201ENST00000383972 102 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 AL139397.2-201ENST00000404529 772 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 BTF3P7-201ENST00000407097 488 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 AL591034.1-201ENST00000407447 340 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 RNA5SP44-201ENST00000410446 133 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN20P56880 RPL23AP82-202ENST00000427528 469 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN20P56880 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN20P56880 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN20P56880 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN20P56880 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN20P56880 RNU6-420P-201ENST00000458780 107 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 RNU6-261P-201ENST00000459506 102 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 RPL37P6-201ENST00000460682 294 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN20P56880 CENPBD1P1-201ENST00000464061 469 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 AL121769.1-201ENST00000469473 401 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 RN7SL283P-201ENST00000489055 303 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 AC093663.1-201ENST00000497190 394 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 FCF1P8-201ENST00000510322 597 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 AF213884.2-201ENST00000510417 903 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 AC074250.1-201ENST00000511117 192 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 AC105417.1-201ENST00000514691 285 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.07□□□□□ -1.92
CLDN20P56880 RNU6-718P-201ENST00000516166 105 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 RNA5SP503-201ENST00000517047 117 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN20P56880 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.07□□□□□ -1.92
CLDN20P56880 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN20P56880 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN20P56880 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN20P56880 AC109635.3-201ENST00000529536 185 ntBASIC3.07□□□□□ -1.92
CLDN20P56880 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN20P56880 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms