Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 GTF2IP20-201ENST00000431663 360 ntBASIC2.73□□□□□ -1.97
CDX1P47902 RPL36AP6-201ENST00000435770 321 ntBASIC2.73□□□□□ -1.97
CDX1P47902 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX1P47902 WASF1P1-201ENST00000447560 1131 ntBASIC2.73□□□□□ -1.97
CDX1P47902 AC008264.1-201ENST00000447612 367 ntBASIC2.73□□□□□ -1.97
CDX1P47902 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX1P47902 AC091153.1-201ENST00000466297 402 ntBASIC2.73□□□□□ -1.97
CDX1P47902 RN7SL601P-201ENST00000471221 293 ntBASIC2.73□□□□□ -1.97
CDX1P47902 RPL7P49-201ENST00000471402 708 ntBASIC2.73□□□□□ -1.97
CDX1P47902 AC004924.1-201ENST00000480160 781 ntBASIC2.73□□□□□ -1.97
CDX1P47902 MTND4P2-201ENST00000507767 1203 ntBASIC2.73□□□□□ -1.97
CDX1P47902 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.73□□□□□ -1.97
CDX1P47902 SNORA70.18-201ENST00000516696 98 ntBASIC2.73□□□□□ -1.97
CDX1P47902 AC090572.1-201ENST00000519251 160 ntBASIC2.73□□□□□ -1.97
CDX1P47902 AC022634.1-201ENST00000520765 532 ntBASIC2.73□□□□□ -1.97
CDX1P47902 SUB1P1-201ENST00000524415 382 ntBASIC2.73□□□□□ -1.97
CDX1P47902 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX1P47902 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX1P47902 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX1P47902 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.73□□□□□ -1.97
CDX1P47902 AC012213.3-201ENST00000577199 777 ntBASIC2.73□□□□□ -1.97
CDX1P47902 MIR4528-201ENST00000577763 90 ntBASIC2.73□□□□□ -1.97
CDX1P47902 NBR2-204ENST00000587322 63 ntBASIC2.73□□□□□ -1.97
CDX1P47902 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.73□□□□□ -1.97
CDX1P47902 RPL23AP78-201ENST00000599928 470 ntBASIC2.73□□□□□ -1.97
CDX1P47902 AL627309.6-201ENST00000606857 840 ntBASIC2.73□□□□□ -1.97
CDX1P47902 MIR15A-201ENST00000607334 83 ntBASIC2.73□□□□□ -1.97
CDX1P47902 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX1P47902 AC109347.2-201ENST00000610220 349 ntBASIC2.73□□□□□ -1.97
CDX1P47902 MIR7975-201ENST00000619350 68 ntBASIC2.73□□□□□ -1.97
CDX1P47902 SNORD39.4-201ENST00000620099 78 ntBASIC2.73□□□□□ -1.97
CDX1P47902 MIR3199-2-201ENST00000636243 86 ntBASIC2.73□□□□□ -1.97
CDX1P47902 U2.21-201ENST00000637295 81 ntBASIC2.73□□□□□ -1.97
CDX1P47902 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDX1P47902 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX1P47902 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CDX1P47902 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDX1P47902 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDX1P47902 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.72□□□□□ -1.97
CDX1P47902 NACAP2-201ENST00000318548 624 ntBASIC2.72□□□□□ -1.97
CDX1P47902 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDX1P47902 RNU6-348P-201ENST00000384386 107 ntBASIC2.72□□□□□ -1.97
CDX1P47902 SNORA24.1-201ENST00000384401 135 ntBASIC2.72□□□□□ -1.97
CDX1P47902 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDX1P47902 AL390237.1-201ENST00000404226 1415 ntBASIC2.72□□□□□ -1.97
CDX1P47902 RNU2-49P-201ENST00000410666 184 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.72□□□□□ -1.97
CDX1P47902 AC080125.1-201ENST00000414888 684 ntBASIC2.72□□□□□ -1.97
CDX1P47902 PIGFP2-201ENST00000421400 651 ntBASIC2.72□□□□□ -1.97
CDX1P47902 ATP5JP1-201ENST00000431631 322 ntBASIC2.72□□□□□ -1.97
CDX1P47902 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.72□□□□□ -1.97
CDX1P47902 GPR143P-201ENST00000434155 205 ntBASIC2.72□□□□□ -1.97
CDX1P47902 RPS20P5-201ENST00000434808 360 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AL357552.1-201ENST00000445254 415 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AC079781.2-201ENST00000446424 169 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX1P47902 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX1P47902 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX1P47902 KLF3P2-201ENST00000465138 268 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AC126389.1-201ENST00000477436 290 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.72□□□□□ -1.97
CDX1P47902 AC116562.3-201ENST00000506136 177 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX1P47902 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX1P47902 RNU6-410P-201ENST00000517006 107 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.72□□□□□ -1.97
CDX1P47902 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX1P47902 AC068587.5-201ENST00000528506 175 ntBASIC2.72□□□□□ -1.97
CDX1P47902 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.72□□□□□ -1.97
CDX1P47902 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.72□□□□□ -1.97
CDX1P47902 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.72□□□□□ -1.97
CDX1P47902 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX1P47902 AC110491.1-201ENST00000562191 2010 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.72□□□□□ -1.97
CDX1P47902 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX1P47902 RSL24D1P11-201ENST00000591045 491 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AC006557.5-201ENST00000603126 811 ntBASIC2.72□□□□□ -1.97
CDX1P47902 Z84480.1-201ENST00000605131 311 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AL121992.2-201ENST00000606262 256 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AL139286.2-201ENST00000606838 396 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AC098614.4-201ENST00000607601 462 ntBASIC2.72□□□□□ -1.97
CDX1P47902 AC069234.5-201ENST00000611056 416 ntBASIC2.72□□□□□ -1.97
CDX1P47902 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CDX1P47902 U4.6-201ENST00000621618 127 ntBASIC2.72□□□□□ -1.97
CDX1P47902 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.72□□□□□ -1.97
CDX1P47902 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CDX1P47902 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDX1P47902 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.72□□□□□ -1.97
CDX1P47902 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDX1P47902 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.71□□□□□ -1.97
CDX1P47902 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
CDX1P47902 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.71□□□□□ -1.98
CDX1P47902 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDX1P47902 Y_RNA.22-201ENST00000362492 102 ntBASIC2.71□□□□□ -1.98
CDX1P47902 RNU6-179P-201ENST00000363350 107 ntBASIC2.71□□□□□ -1.98
CDX1P47902 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CDX1P47902 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDX1P47902 SNORA75-201ENST00000384158 137 ntBASIC2.71□□□□□ -1.98
CDX1P47902 Y_RNA.534-201ENST00000384599 112 ntBASIC2.71□□□□□ -1.98
CDX1P47902 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms