Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 Y_RNA.33-201ENST00000362591 102 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 SNORA4.3-201ENST00000365564 137 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCD3P28288 Y_RNA.576-201ENST00000384781 102 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 SAR1AP2-201ENST00000392696 594 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 CISD1P1-201ENST00000393907 327 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCD3P28288 AL160275.3-201ENST00000423876 471 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 AL589823.1-201ENST00000429577 183 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCD3P28288 CYCSP32-201ENST00000440548 321 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 RPS29P31-201ENST00000446147 164 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 VN1R34P-201ENST00000447387 883 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 AL356010.1-201ENST00000456364 102 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCD3P28288 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.24□□□□□ -1.89
ABCD3P28288 TRBV1-201ENST00000476502 284 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCD3P28288 AC011825.1-201ENST00000484967 388 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 EIF4EP3-201ENST00000498782 656 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 AC104806.1-201ENST00000508720 308 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 RNU6-703P-201ENST00000516946 107 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 AC093331.1-201ENST00000521474 169 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.24□□□□□ -1.89
ABCD3P28288 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.24□□□□□ -1.89
ABCD3P28288 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCD3P28288 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
ABCD3P28288 MIR3922-201ENST00000585192 84 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 HMGN2P15-201ENST00000585707 270 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.24□□□□□ -1.89
ABCD3P28288 AC012507.3-201ENST00000603556 477 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 AL391646.1-201ENST00000603860 190 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 AC008536.2-201ENST00000607284 349 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.24□□□□□ -1.89
ABCD3P28288 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.24□□□□□ -1.89
ABCD3P28288 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ABCD3P28288 AC110491.1-201ENST00000562191 2010 ntBASIC3.24□□□□□ -1.89
ABCD3P28288 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.23□□□□□ -1.89
ABCD3P28288 NACAP2-201ENST00000318548 624 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ABCD3P28288 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ABCD3P28288 RPS4XP8-201ENST00000402039 771 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 RNA5SP111-201ENST00000411386 101 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 USP9YP6-201ENST00000413550 854 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.23□□□□□ -1.89
ABCD3P28288 AC245291.1-201ENST00000419501 328 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AL353729.1-201ENST00000425044 720 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 SKA2P1-201ENST00000425592 390 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AC098614.2-201ENST00000426040 255 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 ATP5JP1-201ENST00000431631 322 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.23□□□□□ -1.89
ABCD3P28288 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.23□□□□□ -1.89
ABCD3P28288 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.23□□□□□ -1.89
ABCD3P28288 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.23□□□□□ -1.89
ABCD3P28288 ELOCP23-201ENST00000452014 332 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 RBMY2UP-201ENST00000453474 324 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 GMFBP1-201ENST00000467831 427 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 RPS27AP10-201ENST00000496103 208 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 RBBP4P6-201ENST00000508098 202 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 MTND4LP22-201ENST00000508209 276 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AC110768.1-201ENST00000509222 400 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AC105417.1-201ENST00000514691 285 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.23□□□□□ -1.89
ABCD3P28288 AC022634.1-201ENST00000520765 532 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AP006245.1-201ENST00000522549 120 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 PSMA2P1-201ENST00000526365 646 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.23□□□□□ -1.89
ABCD3P28288 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.23□□□□□ -1.89
ABCD3P28288 MIR4444-1-201ENST00000581696 74 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 MIR4444-2-201ENST00000584390 74 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.23□□□□□ -1.89
ABCD3P28288 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.23□□□□□ -1.89
ABCD3P28288 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.23□□□□□ -1.89
ABCD3P28288 AL138889.2-201ENST00000603883 242 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 MTND4LP5-201ENST00000605152 292 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 MIR92B-201ENST00000607575 96 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AL158209.2-201ENST00000619266 216 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AC024940.5-201ENST00000622889 474 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AC011155.2-201ENST00000623202 216 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 AC068647.1-201ENST00000489539 2265 ntBASIC3.23□□□□□ -1.89
ABCD3P28288 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.23□□□□□ -1.89
ABCD3P28288 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ABCD3P28288 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ABCD3P28288 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.23□□□□□ -1.89
ABCD3P28288 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ABCD3P28288 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
ABCD3P28288 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ABCD3P28288 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.22□□□□□ -1.89
ABCD3P28288 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ABCD3P28288 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.22□□□□□ -1.89
ABCD3P28288 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ABCD3P28288 RNU6-1287P-201ENST00000362914 107 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 RNU6-1060P-201ENST00000384664 107 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 MIR670-201ENST00000390142 98 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ABCD3P28288 RNU2-9P-201ENST00000410194 145 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.22□□□□□ -1.89
ABCD3P28288 AC063979.1-201ENST00000415539 377 ntBASIC3.22□□□□□ -1.89
ABCD3P28288 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.22□□□□□ -1.89
ABCD3P28288 BPY2DP-201ENST00000422208 265 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms