Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH3P22223 MTND3P17-201ENST00000416968 344 ntBASIC3.01□□□□□ -1.93
CDH3P22223 NDUFB4P7-201ENST00000423198 363 ntBASIC3.01□□□□□ -1.93
CDH3P22223 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CDH3P22223 USP12PX-201ENST00000432383 1057 ntBASIC3.01□□□□□ -1.93
CDH3P22223 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH3P22223 UBBP3-201ENST00000445497 241 ntBASIC3.01□□□□□ -1.93
CDH3P22223 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH3P22223 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH3P22223 AL359385.1-201ENST00000456509 365 ntBASIC3.01□□□□□ -1.93
CDH3P22223 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.01□□□□□ -1.93
CDH3P22223 SCARNA15.2-201ENST00000516409 127 ntBASIC3.01□□□□□ -1.93
CDH3P22223 RNU6-405P-201ENST00000516637 110 ntBASIC3.01□□□□□ -1.93
CDH3P22223 RN7SKP272-201ENST00000516988 232 ntBASIC3.01□□□□□ -1.93
CDH3P22223 RNU6-430P-201ENST00000517078 107 ntBASIC3.01□□□□□ -1.93
CDH3P22223 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH3P22223 AC022616.3-201ENST00000523940 148 ntBASIC3.01□□□□□ -1.93
CDH3P22223 AP002404.1-201ENST00000532005 451 ntBASIC3.01□□□□□ -1.93
CDH3P22223 MIR3167-201ENST00000579623 85 ntBASIC3.01□□□□□ -1.93
CDH3P22223 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH3P22223 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH3P22223 AL161729.4-201ENST00000604650 476 ntBASIC3.01□□□□□ -1.93
CDH3P22223 AL591516.1-201ENST00000611326 274 ntBASIC3.01□□□□□ -1.93
CDH3P22223 MIR6733-201ENST00000635723 61 ntBASIC3.01□□□□□ -1.93
CDH3P22223 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH3P22223 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.01□□□□□ -1.93
CDH3P22223 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH3P22223 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH3P22223 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
CDH3P22223 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
CDH3P22223 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CDH3P22223 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH3P22223 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH3P22223 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDH3P22223 RNU2-8P-201ENST00000410727 190 ntBASIC3□□□□□ -1.93
CDH3P22223 AC127391.1-201ENST00000411737 98 ntBASIC3□□□□□ -1.93
CDH3P22223 AC096664.2-201ENST00000411843 406 ntBASIC3□□□□□ -1.93
CDH3P22223 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3□□□□□ -1.93
CDH3P22223 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3□□□□□ -1.93
CDH3P22223 BX295541.1-201ENST00000417774 250 ntBASIC3□□□□□ -1.93
CDH3P22223 AL451054.2-201ENST00000420896 202 ntBASIC3□□□□□ -1.93
CDH3P22223 AC091390.3-201ENST00000426478 338 ntBASIC3□□□□□ -1.93
CDH3P22223 RPL7L1P10-201ENST00000427790 463 ntBASIC3□□□□□ -1.93
CDH3P22223 RPL31P35-201ENST00000431058 377 ntBASIC3□□□□□ -1.93
CDH3P22223 MTCO3P5-201ENST00000433620 714 ntBASIC3□□□□□ -1.93
CDH3P22223 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3□□□□□ -1.93
CDH3P22223 RPL39P40-201ENST00000445481 146 ntBASIC3□□□□□ -1.93
CDH3P22223 AC020550.1-201ENST00000447385 163 ntBASIC3□□□□□ -1.93
CDH3P22223 AC079448.1-201ENST00000449377 373 ntBASIC3□□□□□ -1.93
CDH3P22223 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3□□□□□ -1.93
CDH3P22223 RBM43P1-201ENST00000476891 1081 ntBASIC3□□□□□ -1.93
CDH3P22223 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3□□□□□ -1.93
CDH3P22223 AC004924.1-201ENST00000480160 781 ntBASIC3□□□□□ -1.93
CDH3P22223 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3□□□□□ -1.93
CDH3P22223 TTC39CP1-201ENST00000512513 755 ntBASIC3□□□□□ -1.93
CDH3P22223 Y_RNA.655-201ENST00000515919 96 ntBASIC3□□□□□ -1.93
CDH3P22223 RNU6-390P-201ENST00000516259 103 ntBASIC3□□□□□ -1.93
CDH3P22223 RNA5SP76-201ENST00000516277 87 ntBASIC3□□□□□ -1.93
CDH3P22223 RNU6-1256P-201ENST00000516539 103 ntBASIC3□□□□□ -1.93
CDH3P22223 Vault.3-201ENST00000516676 95 ntBASIC3□□□□□ -1.93
CDH3P22223 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3□□□□□ -1.93
CDH3P22223 AC093012.1-202ENST00000549403 582 ntBASIC3□□□□□ -1.93
CDH3P22223 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3□□□□□ -1.93
CDH3P22223 NRBF2P1-201ENST00000587407 859 ntBASIC3□□□□□ -1.93
CDH3P22223 AC004223.2-201ENST00000590309 544 ntBASIC3□□□□□ -1.93
CDH3P22223 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3□□□□□ -1.93
CDH3P22223 AC013553.2-201ENST00000604244 589 ntBASIC3□□□□□ -1.93
CDH3P22223 AC104073.3-201ENST00000610942 955 ntBASIC3□□□□□ -1.93
CDH3P22223 Z99129.1-201ENST00000612510 255 ntBASIC3□□□□□ -1.93
CDH3P22223 AC107871.2-201ENST00000612894 502 ntBASIC3□□□□□ -1.93
CDH3P22223 AL133173.2-201ENST00000614270 90 ntBASIC3□□□□□ -1.93
CDH3P22223 AC091834.1-201ENST00000614543 472 ntBASIC3□□□□□ -1.93
CDH3P22223 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3□□□□□ -1.93
CDH3P22223 AC099842.1-201ENST00000619919 596 ntBASIC3□□□□□ -1.93
CDH3P22223 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CDH3P22223 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH3P22223 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH3P22223 AC008568.2-201ENST00000623862 2313 ntBASIC2.99□□□□□ -1.93
CDH3P22223 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDH3P22223 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
CDH3P22223 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.99□□□□□ -1.93
CDH3P22223 SNORA71.1-201ENST00000364523 117 ntBASIC2.99□□□□□ -1.93
CDH3P22223 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDH3P22223 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CDH3P22223 MIR1290-201ENST00000408735 78 ntBASIC2.99□□□□□ -1.93
CDH3P22223 RNU2-66P-201ENST00000410650 161 ntBASIC2.99□□□□□ -1.93
CDH3P22223 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH3P22223 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH3P22223 ELOCP4-201ENST00000420090 333 ntBASIC2.99□□□□□ -1.93
CDH3P22223 FCF1P1-201ENST00000432690 571 ntBASIC2.99□□□□□ -1.93
CDH3P22223 NDUFB4P6-201ENST00000436819 366 ntBASIC2.99□□□□□ -1.93
CDH3P22223 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH3P22223 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH3P22223 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.99□□□□□ -1.93
CDH3P22223 RPS20P20-201ENST00000460498 340 ntBASIC2.99□□□□□ -1.93
CDH3P22223 MTND2P33-201ENST00000506452 1031 ntBASIC2.99□□□□□ -1.93
CDH3P22223 AC008885.1-201ENST00000514930 301 ntBASIC2.99□□□□□ -1.93
CDH3P22223 RN7SKP298-201ENST00000515950 94 ntBASIC2.99□□□□□ -1.93
CDH3P22223 AC009812.2-201ENST00000517657 457 ntBASIC2.99□□□□□ -1.93
CDH3P22223 MTCO2P4-201ENST00000517968 247 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms